SCOPe 2.08: Domain d1oimb1: 1oim B:2-446

Lineage for d1oimb1 (1oim B:2-446)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.4: Family 1 of glycosyl hydrolase [51521] (6 proteins)

6. Protein Beta-glucosidase A [51528] (10 species)

7. Species Thermotoga maritima [TaxId:2336] [89475] (8 PDB entries)
   Uniprot Q08638

8. Domain d1oimb1: 1oim B:2-446 [93066]
   Other proteins in same PDB: d1oimb2
   complexed with noj

Details for d1oimb1

PDB Entry: 1oim, 2.15 Å

PDB Description: family 1 b-glucosidase from thermotoga maritima

PDB Compounds: (B:) beta-glucosidase a

SCOPe Domain Sequences for d1oimb1:

Sequence, based on SEQRES records:

>d1oimb1 c.1.8.4 (B:2-446) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
nvkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrw
kedieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyh
wdlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvha
pgmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepasekeediravrf
mhqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvk
fdpdapakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvs
edgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdy
stqkrivkdsgywysnvvknngled

Sequence, based on observed residues (ATOM records):

>d1oimb1 c.1.8.4 (B:2-446) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]}
nvkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrw
kedieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyh
wdlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvha
pgmrdiyvafravhnllraharavkvfretvdgkigivfnngyfepasekeediravrfm
hqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkf
dpdaakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvsed
grvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdyst
qkrivkdsgywysnvvknngled

Timeline for d1oimb1:

• d1oimb1 first appeared in SCOP 1.67, called d1oimb_
  
• d1oimb1 appears in SCOPe 2.07