Lineage for d1ogyd_ (1ogy D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2012598Fold a.138: Multiheme cytochromes [48694] (1 superfamily)
    variable number of helices and little beta structure; not a true fold
  4. 2012599Superfamily a.138.1: Multiheme cytochromes [48695] (4 families) (S)
    duplication: contains multiple CxxCH motifs
  5. 2012738Family a.138.1.3: Di-heme elbow motif [48711] (8 protein domains)
    the main characteristic feature of this motif is the packing of its two hemes
    many members contains one or more complete motifs flanked by incomplete motifs and/or other domains
  6. 2012817Protein Periplasmic nitrate reductase subunit NapB [74805] (2 species)
  7. 2012820Species Rhodobacter sphaeroides [TaxId:1063] [101503] (1 PDB entry)
  8. 2012822Domain d1ogyd_: 1ogy D: [92957]
    Other proteins in same PDB: d1ogya1, d1ogya2, d1ogyc1, d1ogyc2, d1ogye1, d1ogye2, d1ogyg1, d1ogyg2, d1ogyi1, d1ogyi2, d1ogyk1, d1ogyk2, d1ogym1, d1ogym2, d1ogyo1, d1ogyo2
    complexed with hec, mgd, mo, sf4

Details for d1ogyd_

PDB Entry: 1ogy (more details), 3.2 Å

PDB Description: crystal structure of the heterodimeric nitrate reductase from rhodobacter sphaeroides
PDB Compounds: (D:) diheme cytochrome c napb molecule: nitrate reductase

SCOPe Domain Sequences for d1ogyd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ogyd_ a.138.1.3 (D:) Periplasmic nitrate reductase subunit NapB {Rhodobacter sphaeroides [TaxId: 1063]}

SCOPe Domain Coordinates for d1ogyd_:

Click to download the PDB-style file with coordinates for d1ogyd_.
(The format of our PDB-style files is described here.)

Timeline for d1ogyd_: