Lineage for d1ogtb1 (1ogt B:1-99)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2020525Protein beta2-microglobulin [88600] (5 species)
  7. 2020537Species Human (Homo sapiens) [TaxId:9606] [88602] (406 PDB entries)
    Uniprot P61769 21-119 ! Uniprot P01884
  8. 2020550Domain d1ogtb1: 1ogt B:1-99 [92941]
    Other proteins in same PDB: d1ogta1, d1ogta2, d1ogtb2
    complexed with gol, mn

Details for d1ogtb1

PDB Entry: 1ogt (more details), 1.47 Å

PDB Description: crystal structure of hla-b*2705 complexed with the vasoactive intestinal peptide type 1 receptor (vipr) peptide (residues 400-408)
PDB Compounds: (B:) Beta-2-microglobulin

SCOPe Domain Sequences for d1ogtb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ogtb1 b.1.1.2 (B:1-99) beta2-microglobulin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d1ogtb1:

Click to download the PDB-style file with coordinates for d1ogtb1.
(The format of our PDB-style files is described here.)

Timeline for d1ogtb1:

View in 3D
Domains from same chain:
(mouse over for more information)