Lineage for d1ogkd_ (1ogk D:)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.204: all-alpha NTP pyrophosphatases [101385] (1 superfamily)
    multihelical: dimeric 4-helical bundle surrounded by other helices; oligomerizes further in a tetramer
  4. Superfamily a.204.1: all-alpha NTP pyrophosphatases [101386] (5 families) (S)
    basic module consist of 5 active site-forming helices; four from one subunit/structural repeat; the fifth from the other subunit/repeat
  5. Family a.204.1.1: Type II deoxyuridine triphosphatase [101387] (1 protein)
    one subunit comprises two degenerate structural repeats, organised into the "rigid" and "mobile" subdomains
  6. Protein Type II deoxyuridine triphosphatase [101388] (2 species)
  7. Species Trypanosoma cruzi [TaxId:5693] [101389] (2 PDB entries)
  8. Domain d1ogkd_: 1ogk D: [92920]
    complexed with dud

Details for d1ogkd_

PDB Entry: 1ogk (more details), 2.85 Å

PDB Description: the crystal structure of trypanosoma cruzi dutpase in complex with dudp
PDB Compounds: (D:) deoxyuridine triphosphatase

SCOPe Domain Sequences for d1ogkd_:

Sequence, based on SEQRES records: (download)

>d1ogkd_ a.204.1.1 (D:) Type II deoxyuridine triphosphatase {Trypanosoma cruzi [TaxId: 5693]}
parvlnslahlqdglnifmdpdwrqirhvddwalaitmesaelidsypwkwwknvkaqtd
mhnvrieiadilhfslsgeiqkrtqdekgaddvalkslkemgffcrppahakstaasgqr
tnggdgdgddellelmffpltevasavatfrniiqlasiyrfdlitkglllaaqdldfnl
vgyyvakytlnqirqlkgykegvyvkvregvednellhecvqsvsvedvlnegtylkawe
kiacsvfdafgmpeeerrhaydwlksaal

Sequence, based on observed residues (ATOM records): (download)

>d1ogkd_ a.204.1.1 (D:) Type II deoxyuridine triphosphatase {Trypanosoma cruzi [TaxId: 5693]}
parvlnslahlqdglnifmdpdwrqirhvddwalaitmesaelidsypwkwwknvkaqtd
mhnvrieiadilhfslsgeiqkralkslkemgffcrppdellelmffpltevasavatfr
niiqlasiyrfdlitkglllaaqdldfnlvgyyvakytlnqirqlkgykegvyvkvregv
ednellhecvqsvsvedvlnegtylkawekiacsvfdafgmpeeerrhaydwlksaal

SCOPe Domain Coordinates for d1ogkd_ are not available.

Timeline for d1ogkd_:

Domains from other chains:
(mouse over for more information)
d1ogka_, d1ogkb_, d1ogke_