SCOP 1.67: Domain d1oaxo_: 1oax O:

Lineage for d1oaxo_ (1oax O:)

1. Root: SCOP 1.67

2. Class b: All beta proteins [48724] (141 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (24 proteins)

6. Protein Immunoglobulin light chain lambda variable domain, VL-lambda [88534] (9 species)
   VL-lambda domains of human antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the human genome; mouse VL-lambda domains belong to a single germline family

7. Species Rat (Rattus norvegicus) [TaxId:10116] [101504] (7 PDB entries)

8. Domain d1oaxo_: 1oax O: [92732]
   Other proteins in same PDB: d1oaxh_, d1oaxi_, d1oaxj_, d1oaxk_
   part of IgE Fv spe-7
   complexed with anq

Details for d1oaxo_

PDB Entry: 1oax, 2.66 Å

PDB Description: Fv Structure of the IgE SPE-7 in complex with acenaphthenequinone

SCOP Domain Sequences for d1oaxo_:

Sequence, based on SEQRES records:

>d1oaxo_ b.1.1.1 (O:) Immunoglobulin light chain lambda variable domain, VL-lambda {Rat (Rattus norvegicus)}
avvtqesalttspgetvtltcrsstgavttsnyanwvqekprhlftgliggtnnrapgvp
arfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl

Sequence, based on observed residues (ATOM records):

>d1oaxo_ b.1.1.1 (O:) Immunoglobulin light chain lambda variable domain, VL-lambda {Rat (Rattus norvegicus)}
avvtqesalttspgetvtltcrsstavttsnyanwvqekprhlftgliggtnnrapgvpa
rfsgslignkaaltitgaqtedeaiyfcalwysnhlvfgggtkltvl

Timeline for d1oaxo_:

• d1oaxo_ is new in SCOP 1.67
  
• d1oaxo_ appears in SCOP 1.69
  
• d1oaxo_ appears in the current release, SCOPe 2.08