Lineage for d1o60b_ (1o60 B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2085156Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2086072Family c.1.10.4: Class I DAHP synthetase [51599] (3 protein domains)
  6. 2086149Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602] (4 species)
  7. 2086259Species Haemophilus influenzae [TaxId:727] [102095] (1 PDB entry)
  8. 2086261Domain d1o60b_: 1o60 B: [92533]
    structural genomics

Details for d1o60b_

PDB Entry: 1o60 (more details), 1.8 Å

PDB Description: crystal structure of kdo-8-phosphate synthase
PDB Compounds: (B:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d1o60b_:

Sequence, based on SEQRES records: (download)

>d1o60b_ c.1.10.4 (B:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Haemophilus influenzae [TaxId: 727]}
qnkivkignidvandkpfvlfggmnvlesrdmamqvceayvkvteklgvpyvfkasfdka
nrssihsyrgpgmeeglkifqelkdtfgvkiitdvheiyqcqpvadvvdiiqlpaflarq
tdlveamaktgavinvkkpqflspsqmgnivekieecgndkiilcdrgtnfgydnlivdm
lgfsvmkkaskgspvifdvthslqcrdpfgaassgrraqvtelarsglavgiaglfleah
pnpnqakcdgpsalplsalegfvsqmkaiddlvksfpeldt

Sequence, based on observed residues (ATOM records): (download)

>d1o60b_ c.1.10.4 (B:) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Haemophilus influenzae [TaxId: 727]}
qnkivkignidvandkpfvlfggmnvlesrdmamqvceayvkvteklgvpyvfkasfdka
nrssihsyrgpgmeeglkifqelkdtfgvkiitdvheiyqcqpvadvvdiiqlpaflarq
tdlveamaktgavinvkkpqflspsqmgnivekieecgndkiilcdrgtnfgydnlivdm
lgfsvmkkaskgspvifdvthslqraqvtelarsglavgiaglfleahpnpnqakcdgps
alplsalegfvsqmkaiddlvksfpeldt

SCOPe Domain Coordinates for d1o60b_:

Click to download the PDB-style file with coordinates for d1o60b_.
(The format of our PDB-style files is described here.)

Timeline for d1o60b_: