SCOPe 2.05: Domain d1o5qb_: 1o5q B:

Lineage for d1o5qb_ (1o5q B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families)

5. Family c.1.12.7: Phosphoenolpyruvate mutase/Isocitrate lyase-like [88704] (4 proteins)
   forms a swapped dimer

6. Protein 2-methylisocitrate lyase [89499] (2 species)

7. Species Salmonella typhimurium [TaxId:90371] [102099] (2 PDB entries)

8. Domain d1o5qb_: 1o5q B: [92515]
   complexed with mg, pyr

Details for d1o5qb_

PDB Entry: 1o5q, 2.3 Å

PDB Description: Crystal Structure of Pyruvate and Mg2+ bound 2-methylisocitrate lyase (PrpB) from Salmonella typhimurium

PDB Compounds: (B:) Probable methylisocitrate lyase

SCOPe Domain Sequences for d1o5qb_:

Sequence, based on SEQRES records:

>d1o5qb_ c.1.12.7 (B:) 2-methylisocitrate lyase {Salmonella typhimurium [TaxId: 90371]}
spgqafraalakenplqivgainanhallaqragyqaiylsgggvaagslglpdlgistl
ddvltdirritdvcplpllvdadigfgssafnvartvksiakagaaalhiedqvgakrcg
hrpnkaivskeemvdriraavdartdpnfvimartdalavegleaaldraqayvdagadm
lfpeaitelsmyrrfadvaqvpilanitefgatplfttdelrsahvamalyplsaframn
raaekvytvlrqegtqknvidimqtrnelyesinyyqfe

Sequence, based on observed residues (ATOM records):

>d1o5qb_ c.1.12.7 (B:) 2-methylisocitrate lyase {Salmonella typhimurium [TaxId: 90371]}
spgqafraalakenplqivgainanhallaqragyqaiylsgggvaagslglpdlgistl
ddvltdirritdvcplpllvdadigfgssafnvartvksiakagaaalhiedqvaivske
emvdriraavdartdpnfvimartdalavegleaaldraqayvdagadmlfpeaitelsm
yrrfadvaqvpilanitefgatplfttdelrsahvamalyplsaframnraaekvytvlr
qegtqknvidimqtrnelyesinyyqfe

Timeline for d1o5qb_:

• d1o5qb_ first appeared in SCOP 1.67
  
• d1o5qb_ appears in SCOPe 2.04
  
• d1o5qb_ appears in SCOPe 2.06
  
• d1o5qb_ appears in the current release, SCOPe 2.08