Lineage for d1o4xb_ (1o4x B:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2311321Fold a.21: HMG-box [47094] (1 superfamily)
    3 helices; irregular array
  4. 2311322Superfamily a.21.1: HMG-box [47095] (2 families) (S)
  5. 2311323Family a.21.1.1: HMG-box [47096] (10 proteins)
  6. 2311364Protein Sox-2 [81718] (2 species)
  7. 2311365Species Human (Homo sapiens) [TaxId:9606] [101105] (3 PDB entries)
  8. 2311368Domain d1o4xb_: 1o4x B: [92472]
    Other proteins in same PDB: d1o4xa1, d1o4xa2
    protein/DNA complex

Details for d1o4xb_

PDB Entry: 1o4x (more details)

PDB Description: ternary complex of the dna binding domains of the oct1 and sox2 transcription factors with a 19mer oligonucleotide from the hoxb1 regulatory element
PDB Compounds: (B:) transcription factor sox-2

SCOPe Domain Sequences for d1o4xb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1o4xb_ a.21.1.1 (B:) Sox-2 {Human (Homo sapiens) [TaxId: 9606]}
drvkrpmnafmvwsrgqrrkmaqenpkmhnseiskrlgaewkllsetekrpfideakrlr
alhmkehpdykyrprrk

SCOPe Domain Coordinates for d1o4xb_:

Click to download the PDB-style file with coordinates for d1o4xb_.
(The format of our PDB-style files is described here.)

Timeline for d1o4xb_: