Lineage for d1njjd1 (1njj D:20-43,D:284-409)

  1. Root: SCOP 1.71
  2. 546417Class b: All beta proteins [48724] (149 folds)
  3. 562760Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (3 superfamilies)
    barrel, closed; n=6, S=8; greek-key
  4. 562853Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families) (S)
    the barrel is decorated with additional structures
  5. 562881Family b.49.2.3: Eukaryotic ODC-like [88683] (2 proteins)
    barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel
  6. 562898Protein Eukaryotic ornithine decarboxylase (ODC) [50625] (3 species)
  7. 562904Species Trypanosoma brucei [TaxId:5691] [50628] (5 PDB entries)
  8. 562920Domain d1njjd1: 1njj D:20-43,D:284-409 [91911]
    Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
    complexed with get, orx

Details for d1njjd1

PDB Entry: 1njj (more details), 2.45 Å

PDB Description: crystal structure determination of t. brucei ornithine decarboxylase bound to d-ornithine and to g418

SCOP Domain Sequences for d1njjd1:

Sequence, based on SEQRES records: (download)

>d1njjd1 b.49.2.3 (D:20-43,D:284-409) Eukaryotic ornithine decarboxylase (ODC) {Trypanosoma brucei}
ntrdalckkismntcdegdpffvaXftlavnviakkvtpgvqtdvgahaesnaqsfmyyv
ndgvygsfncilydhavvrplpqrepipneklypssvwgptcdgldqiveryylpemqvg
ewllfedmgaytvvgtssfngfqsptiyyvv

Sequence, based on observed residues (ATOM records): (download)

>d1njjd1 b.49.2.3 (D:20-43,D:284-409) Eukaryotic ornithine decarboxylase (ODC) {Trypanosoma brucei}
ntrdalckkisgdpffvaXftlavnviakkvtsnaqsfmyyvndgvygsfncilydhavv
rplpqrepipneklypssvwgptcdgldqiveryylpemqvgewllfedmgaytvfqspt
iyyvv

SCOP Domain Coordinates for d1njjd1:

Click to download the PDB-style file with coordinates for d1njjd1.
(The format of our PDB-style files is described here.)

Timeline for d1njjd1: