Lineage for d1miel1 (1mie L:1-107)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652980Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 653172Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (127 PDB entries)
  8. 653208Domain d1miel1: 1mie L:1-107 [91283]
    Other proteins in same PDB: d1mieh1, d1mieh2, d1miel2
    part of the esterolytic Fab ms6-164

Details for d1miel1

PDB Entry: 1mie (more details), 1.95 Å

PDB Description: Crystal Structure Of The Fab Fragment of Esterolytic Antibody MS5-393
PDB Compounds: (L:) immunoglobulin ms5-393

SCOP Domain Sequences for d1miel1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1miel1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}
eivmtqaapsvpvtpgesvsiscrssksllhsngntylnwflqrpgqspqlliyrmsnla
sgvpdrfsgsgsetaftlrtsrveaedvgvyycmqhleypftfgsgtklelk

SCOP Domain Coordinates for d1miel1:

Click to download the PDB-style file with coordinates for d1miel1.
(The format of our PDB-style files is described here.)

Timeline for d1miel1:

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Domains from same chain:
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d1miel2