Lineage for d1ko0a2 (1ko0 A:32-278)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829052Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 2829053Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (4 proteins)
  6. 2829088Protein Diaminopimelate decarboxylase LysA [89457] (3 species)
    most similar to eukaryotic ODC
  7. 2829089Species Escherichia coli [TaxId:562] [102048] (2 PDB entries)
  8. 2829091Domain d1ko0a2: 1ko0 A:32-278 [90972]
    Other proteins in same PDB: d1ko0a1
    complexed with lys, plp

Details for d1ko0a2

PDB Entry: 1ko0 (more details), 2.2 Å

PDB Description: Crystal Structure of a D,L-lysine complex of diaminopimelate decarboxylase
PDB Compounds: (A:) diaminopimelate decarboxylase

SCOPe Domain Sequences for d1ko0a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ko0a2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d1ko0a2:

Click to download the PDB-style file with coordinates for d1ko0a2.
(The format of our PDB-style files is described here.)

Timeline for d1ko0a2:

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