SCOPe 2.08: Domain d1k5s.1: 1k5s A:,B:

Lineage for d1k5s.1 (1k5s A:,B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.2: Penicillin acylase, catalytic domain [56244] (3 proteins)

6. Protein Penicillin acylase [56245] (2 species)
   also contains 2 all-alpha and a beta-barrel domains
   will be divided into domains in future release

7. Species Escherichia coli [TaxId:562] [56246] (24 PDB entries)

8. Domain d1k5s.1: 1k5s A:,B: [90938]
   complexed with ca, gro; mutant

Details for d1k5s.1

PDB Entry: 1k5s, 2.43 Å

PDB Description: penicillin acylase, mutant complexed with ppa

PDB Compounds: (A:) penicillin g acylase alpha subunit, (B:) penicillin g acylase beta subunit

SCOPe Domain Sequences for d1k5s.1:

Sequence; same for both SEQRES and ATOM records:

>g1k5s.1 d.153.1.2 (A:,B:) Penicillin acylase {Escherichia coli [TaxId: 562]}
ssseikivrdeygmphiyandtwhlfygygyvvaqdrlfqmemarrstqgtvaevlgkdf
vkfdkdirrnywpdairaqiaalspedmsilqgyadgmnawidkvntnpetllpkqfntf
gftpkrwepfdvamifvgtmanrfsdstseidnlalltalkdkygvsqgmavfnqlkwlv
npsapttiavqesnyplkfnqqnsqtXsnmwvigkskaqdakaimvngpqagwyapayty
giglhgagydvtgntpfaypglvfghngviswgstagfgddvdifaerlsaekpgyylhn
gkwvkmlsreetitvkngqaetftvwrtvhgnilqtdqttqtayaksrawdgkelaslla
wthqmkaknwqewtqqaakqaltinwyyadvngnigyvhtgaypdrqsghdprlpvpgtg
kwdwkgllpfemnpkvynpqsgyianwnnspqkdypasdlfaflwggadrvteidrlleq
kprltadqawdvirqtsrqdlnlrlflptlqaatsgltqsdprrqlvetltrwdginlln
ddgktwqqpgsailnvwltsmlkrtvvaavpmpfdkwysasgyettqdgptgslnisvga
kilyeavqgdkspipqavdlfagkpqqevvlaaledtwetlskrygnnvsnwktpamalt
frannffgvpqaaaeetrhqaeyqnrgtendmivfspttsdrpvlawdvvapgqsgfiap
dgtvdkhyedqlkmyenfgrkslwltkqdveahkesqevlhvqr

Timeline for d1k5s.1:

• d1k5s.1 first appeared in SCOP 1.67
  
• d1k5s.1 appears in SCOPe 2.07