Lineage for d1j3lf_ (1j3l F:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097883Fold c.8: The "swivelling" beta/beta/alpha domain [52008] (10 superfamilies)
    3 layers: b/b/a; the central sheet is parallel, and the other one is antiparallel; there are some variations in topology
    this domain is thought to be mobile in most multi-domain proteins known to contain it
  4. 2098336Superfamily c.8.7: RraA-like [89562] (2 families) (S)
    structural similarity and possible distant homology to the phosphohistidine domain of pyruvate phosphate dikinase
  5. 2098337Family c.8.7.1: RraA-like [89563] (5 protein domains)
    aka MenG-like; characterized as regulator of RNase E activity A (RraA) that globally modulates RNA abundance in E. coli
    automatically mapped to Pfam PF03737
  6. 2098338Protein Demethylmenaquinone methyltransferase [102196] (1 species)
    as (mis)annotated in the PDB entry; RraA homologue
  7. 2098339Species Thermus thermophilus [TaxId:274] [102197] (1 PDB entry)
  8. 2098345Domain d1j3lf_: 1j3l F: [90818]
    complexed with cl, mg

Details for d1j3lf_

PDB Entry: 1j3l (more details), 2.3 Å

PDB Description: Structure of the RNA-processing inhibitor RraA from Thermus thermophilis
PDB Compounds: (F:) Demethylmenaquinone Methyltransferase

SCOPe Domain Sequences for d1j3lf_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1j3lf_ c.8.7.1 (F:) Demethylmenaquinone methyltransferase {Thermus thermophilus [TaxId: 274]}

SCOPe Domain Coordinates for d1j3lf_:

Click to download the PDB-style file with coordinates for d1j3lf_.
(The format of our PDB-style files is described here.)

Timeline for d1j3lf_: