Lineage for d1hl9b2 (1hl9 B:7-356)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2832205Family c.1.8.11: Putative alpha-L-fucosidase, catalytic domain [102079] (2 proteins)
    glycosyl hydrolase family 29; contains additional beta-barrel with a topological similarity to the C-terminal domain of alpha amylases
    automatically mapped to Pfam PF01120
  6. 2832206Protein Putative alpha-L-fucosidase, catalytic domain [102080] (1 species)
  7. 2832207Species Thermotoga maritima [TaxId:2336] [102081] (3 PDB entries)
    TM0306
  8. 2832211Domain d1hl9b2: 1hl9 B:7-356 [90653]
    Other proteins in same PDB: d1hl9a1, d1hl9b1
    complexed with fuf

Details for d1hl9b2

PDB Entry: 1hl9 (more details), 2.25 Å

PDB Description: crystal structure of thermotoga maritima alpha-fucosidase in complex with a mechanism based inhibitor
PDB Compounds: (B:) putative alpha-l-fucosidase

SCOPe Domain Sequences for d1hl9b2:

Sequence, based on SEQRES records: (download)

>d1hl9b2 c.1.8.11 (B:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]}
rykpdweslrehtvpkwfdkakfgifihwgiysvpgwatptgelgkvpmdawffqnpyae
wyenslrikesptweyhvktygenfeyekfadlftaekwdpqewadlfkkagakyviptt
khhdgfclwgtkytdfnsvkrgpkrdlvgdlakavreaglrfgvyysggldwrfttepir
ypedlsyirpntyeyadyaykqvmelvdlylpdvlwndmgwpekgkedlkylfayyynkh
pegsvndrwgvphwdfktaeyhvnypgdlpgykweftrgiglsfgynrnegpehmlsveq
lvytlvdvvskggnlllnvgpkgdgtipdlqkerllglgewlrkygdaiy

Sequence, based on observed residues (ATOM records): (download)

>d1hl9b2 c.1.8.11 (B:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]}
rykpdweslrehtvpkwfdkakfgifihwgiysvpgwatpdawffqnpyaewyenslrik
esptweyhvktygenfeyekfadlftaekwdpqewadlfkkagakyvipttkhhdgfclw
gtkytdfnsvkrgpkrdlvgdlakavreaglrfgvyysggldwrfttepirypedlsyir
pntyeyadyaykqvmelvdlylpdvlwndmgwpekgkedlkylfayyynkhpegsvndrw
gvphwdfktaeyhlpgykweftrgiglsfgynrnegpehmlsveqlvytlvdvvskggnl
llnvgpkgdgtipdlqkerllglgewlrkygdaiy

SCOPe Domain Coordinates for d1hl9b2:

Click to download the PDB-style file with coordinates for d1hl9b2.
(The format of our PDB-style files is described here.)

Timeline for d1hl9b2:

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Domains from same chain:
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d1hl9b1