Lineage for d1ck0h1 (1ck0 H:1-106)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1287433Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1287434Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1287435Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 1287638Protein Immunoglobulin heavy chain variable domain, VH [88543] (21 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 1287896Species Mouse (Mus musculus), cluster 1 [TaxId:10090] [88548] (57 PDB entries)
    Uniprot P01796 # ! HV27_MOUSE Ig heavy chain V-III region A4
  8. 1287942Domain d1ck0h1: 1ck0 H:1-106 [90422]
    Other proteins in same PDB: d1ck0h2, d1ck0l1, d1ck0l2
    part of anti-anti-idiotypic Fab against human angiotensin II, unliganded form

Details for d1ck0h1

PDB Entry: 1ck0 (more details), 2.5 Å

PDB Description: anti-anti-idiotypic antibody against human angiotensin ii, unliganded form
PDB Compounds: (H:) protein (igg1-kappa antibody 131 (heavy chain))

SCOPe Domain Sequences for d1ck0h1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ck0h1 b.1.1.1 (H:1-106) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}
qvqlqesggglvqprgslklscaasgftfntdamnwvrqapgkglewvarirskgfnfat
yyadsvrdrftisrddsqsmlylqmnnlktedtgiyycvrgrdgeamdy

SCOPe Domain Coordinates for d1ck0h1:

Click to download the PDB-style file with coordinates for d1ck0h1.
(The format of our PDB-style files is described here.)

Timeline for d1ck0h1:

View in 3D
Domains from same chain:
(mouse over for more information)
d1ck0h2