SCOPe 2.01: Domain d1jeyb2: 1jey B:6-241

Lineage for d1jeyb2 (1jey B:6-241)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.62: vWA-like [53299] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

4. Superfamily c.62.1: vWA-like [53300] (6 families)

5. Family c.62.1.4: Ku80 subunit N-terminal domain [100962] (1 protein)

6. Protein Ku80 subunit N-terminal domain [100963] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [100964] (2 PDB entries)

8. Domain d1jeyb2: 1jey B:6-241 [90373]
   Other proteins in same PDB: d1jeya1, d1jeya2, d1jeyb1
   protein/DNA complex

Details for d1jeyb2

PDB Entry: 1jey, 2.5 Å

PDB Description: crystal structure of the ku heterodimer bound to dna

PDB Compounds: (B:) Ku80

SCOPe Domain Sequences for d1jeyb2:

Sequence, based on SEQRES records:

>d1jeyb2 c.62.1.4 (B:6-241) Ku80 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtd
nplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigk
kfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslgkedgsgdrgdgpfrl
gghgpsfplkgiteqqkegleivkmvmislegedgldeiysfseslrklcvfkkie

Sequence, based on observed residues (ATOM records):

>d1jeyb2 c.62.1.4 (B:6-241) Ku80 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
nkaavvlcmdvgftmsnsipgiespfeqakkvitmfvqrqvfaenkdeialvlfgtdgtd
nplsggdqyqnitvhrhlmlpdfdlledieskiqpgsqqadfldalivsmdviqhetigk
kfekrhieiftdlssrfsksqldiiihslkkcdislqfflpfslggpfrlgghgpsfplk
giteqqkegleivkmvmislegedgldeiysfseslrklcvfkkie

Timeline for d1jeyb2:

• d1jeyb2 first appeared in SCOP 1.67
  
• d1jeyb2 appears in SCOP 1.75
  
• d1jeyb2 appears in SCOPe 2.02
  
• d1jeyb2 appears in the current release, SCOPe 2.08