SCOPe 2.05: Domain d1jeqb1: 1jeq B:242-542

Lineage for d1jeqb1 (1jeq B:242-542)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.131: SPOC domain-like [100938] (1 superfamily)
   barrel, closed; n=7, S=10; complex topology

4. Superfamily b.131.1: SPOC domain-like [100939] (3 families)

5. Family b.131.1.2: Ku80 subunit middle domain [100943] (1 protein)
   includes C-terminal alpha-helical arm and DNA encircling insertion

6. Protein Ku80 subunit middle domain [100944] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [100945] (2 PDB entries)

8. Domain d1jeqb1: 1jeq B:242-542 [90368]
   Other proteins in same PDB: d1jeqa1, d1jeqa3, d1jeqa4, d1jeqb2

Details for d1jeqb1

PDB Entry: 1jeq, 2.7 Å

PDB Description: crystal structure of the ku heterodimer

PDB Compounds: (B:) Ku80

SCOPe Domain Sequences for d1jeqb1:

Sequence, based on SEQRES records:

>d1jeqb1 b.131.1.2 (B:242-542) Ku80 subunit middle domain {Human (Homo sapiens) [TaxId: 9606]}
rhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclnddd
etevlkediiqgfrygsdivpfskvdeeqmkyksegkcfsvlgfckssqvqrrffmgnqv
lkvfaarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvy
vqlpfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttk
ipnprfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfplie
a

Sequence, based on observed residues (ATOM records):

>d1jeqb1 b.131.1.2 (B:242-542) Ku80 subunit middle domain {Human (Homo sapiens) [TaxId: 9606]}
rhsihwpcrltigsnlsiriaayksilqervkktwtvvdaktlkkediqketvyclnddd
etevlkediiqgfrygsdivpfdeeqmkyksegkcfsvlgfckssqvqrrffmgnqvlkv
faarddeaaavalsslihalddldmvaivryaydkranpqvgvafphikhnyeclvyvql
pfmedlrqymfsslknskkyapteaqlnavdalidsmslakkdektdtledlfpttkipn
prfqrlfqcllhralhpreplppiqqhiwnmlnppaevttksqiplskiktlfpliea

Timeline for d1jeqb1:

• d1jeqb1 first appeared in SCOP 1.67
  
• d1jeqb1 appears in SCOPe 2.04
  
• d1jeqb1 appears in SCOPe 2.06
  
• d1jeqb1 appears in the current release, SCOPe 2.08