Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

  1. Root: SCOP 1.75
  2. 896322Class i: Low resolution protein structures [58117] (26 folds)
  3. 898089Fold i.8: RNA polymerase [58180] (1 superfamily)
  4. 898090Superfamily i.8.1: RNA polymerase [58181] (1 family) (S)
  5. 898091Family i.8.1.1: RNA polymerase [58182] (2 proteins)
  6. 898092Protein Complete 12-subunit RNA polymerase II complex [90261] (1 species)
  7. 898093Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [90262] (23 PDB entries)

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]:

  1. Domain(s) for 1nik:
    1. 898182Domain d1nika_: 1nik A: [85743]
    2. 898183Domain d1nikb_: 1nik B: [85744]
    3. 898184Domain d1nikc_: 1nik C: [85745]
    4. 898185Domain d1nikd_: 1nik D: [85746]
    5. 898186Domain d1nike_: 1nik E: [85747]
    6. 898187Domain d1nikf_: 1nik F: [85748]
    7. 898188Domain d1nikg_: 1nik G: [85749]
    8. 898189Domain d1nikh_: 1nik H: [85750]
    9. 898190Domain d1niki_: 1nik I: [85751]
    10. 898191Domain d1nikj_: 1nik J: [85752]
    11. 898192Domain d1nikk_: 1nik K: [85753]
    12. 898193Domain d1nikl_: 1nik L: [85754]
  2. Domain(s) for 1nt9:
    1. 898169Domain d1nt9a_: 1nt9 A: [86151]
    2. 898170Domain d1nt9b_: 1nt9 B: [86152]
    3. 898171Domain d1nt9c_: 1nt9 C: [86153]
    4. 898172Domain d1nt9d_: 1nt9 D: [86154]
    5. 898173Domain d1nt9e_: 1nt9 E: [86155]
    6. 898174Domain d1nt9f_: 1nt9 F: [86156]
    7. 898175Domain d1nt9g_: 1nt9 G: [86157]
    8. 898176Domain d1nt9h_: 1nt9 H: [86158]
    9. 898177Domain d1nt9i_: 1nt9 I: [86159]
    10. 898178Domain d1nt9j_: 1nt9 J: [86160]
    11. 898179Domain d1nt9k_: 1nt9 K: [86161]
    12. 898180Domain d1nt9l_: 1nt9 L: [86162]
  3. Domain(s) for 1pqv:
    1. 898143Domain d1pqva_: 1pqv A: [95028]
      complexed with transcription elongation factor S-II
    2. 898144Domain d1pqvb_: 1pqv B: [95029]
      complexed with transcription elongation factor S-II
    3. 898145Domain d1pqvc_: 1pqv C: [95030]
      complexed with transcription elongation factor S-II
    4. 898146Domain d1pqvd_: 1pqv D: [95031]
      complexed with transcription elongation factor S-II
    5. 898147Domain d1pqve_: 1pqv E: [95032]
      complexed with transcription elongation factor S-II
    6. 898148Domain d1pqvf_: 1pqv F: [95033]
      complexed with transcription elongation factor S-II
    7. 898149Domain d1pqvg_: 1pqv G: [95034]
      complexed with transcription elongation factor S-II
    8. 898150Domain d1pqvh_: 1pqv H: [95035]
      complexed with transcription elongation factor S-II
    9. 898151Domain d1pqvi_: 1pqv I: [95036]
      complexed with transcription elongation factor S-II
    10. 898152Domain d1pqvj_: 1pqv J: [95037]
      complexed with transcription elongation factor S-II
    11. 898153Domain d1pqvk_: 1pqv K: [95038]
      complexed with transcription elongation factor S-II
    12. 898154Domain d1pqvl_: 1pqv L: [95039]
      complexed with transcription elongation factor S-II
    13. 898155Domain d1pqvs_: 1pqv S: [95040]
      complexed with transcription elongation factor S-II
  4. Domain(s) for 1r5u:
    1. 898229Domain d1r5ua_: 1r5u A: [97105]
      complexed with transcription elongation factor TFIIB
    2. 898230Domain d1r5ub_: 1r5u B: [97106]
      complexed with transcription elongation factor TFIIB
    3. 898231Domain d1r5uc_: 1r5u C: [97107]
      complexed with transcription elongation factor TFIIB
    4. 898232Domain d1r5ue_: 1r5u E: [97108]
      complexed with transcription elongation factor TFIIB
    5. 898233Domain d1r5uf_: 1r5u F: [97109]
      complexed with transcription elongation factor TFIIB
    6. 898234Domain d1r5uh_: 1r5u H: [97110]
      complexed with transcription elongation factor TFIIB
    7. 898235Domain d1r5ui_: 1r5u I: [97111]
      complexed with transcription elongation factor TFIIB
    8. 898236Domain d1r5uj_: 1r5u J: [97112]
      complexed with transcription elongation factor TFIIB
    9. 898237Domain d1r5uk_: 1r5u K: [97113]
      complexed with transcription elongation factor TFIIB
    10. 898238Domain d1r5ul_: 1r5u L: [97114]
      complexed with transcription elongation factor TFIIB
    11. 898239Domain d1r5um_: 1r5u M: [97115]
      complexed with transcription elongation factor TFIIB
  5. Domain(s) for 1r9s:
    1. 898207Domain d1r9sa_: 1r9s A: [111729]
    2. 898208Domain d1r9sb_: 1r9s B: [111730]
    3. 898209Domain d1r9sc_: 1r9s C: [111731]
    4. 898210Domain d1r9se_: 1r9s E: [111732]
    5. 898211Domain d1r9sf_: 1r9s F: [111733]
    6. 898212Domain d1r9sh_: 1r9s H: [111734]
    7. 898213Domain d1r9si_: 1r9s I: [111735]
    8. 898214Domain d1r9sj_: 1r9s J: [111736]
    9. 898215Domain d1r9sk_: 1r9s K: [111737]
    10. 898216Domain d1r9sl_: 1r9s L: [111738]
  6. Domain(s) for 1r9t:
    1. 898240Domain d1r9ta_: 1r9t A: [111739]
    2. 898241Domain d1r9tb_: 1r9t B: [111740]
    3. 898242Domain d1r9tc_: 1r9t C: [111741]
    4. 898243Domain d1r9te_: 1r9t E: [111742]
    5. 898244Domain d1r9tf_: 1r9t F: [111743]
    6. 898245Domain d1r9th_: 1r9t H: [111744]
    7. 898246Domain d1r9ti_: 1r9t I: [111745]
    8. 898247Domain d1r9tj_: 1r9t J: [111746]
    9. 898248Domain d1r9tk_: 1r9t K: [111747]
    10. 898249Domain d1r9tl_: 1r9t L: [111748]
  7. Domain(s) for 1sfo:
    1. 898250Domain d1sfoa_: 1sfo A: [98834]
      strand separated elongation complex
    2. 898251Domain d1sfob_: 1sfo B: [98835]
      strand separated elongation complex
    3. 898252Domain d1sfoc_: 1sfo C: [98836]
      strand separated elongation complex
    4. 898253Domain d1sfoe_: 1sfo E: [98837]
      strand separated elongation complex
    5. 898254Domain d1sfof_: 1sfo F: [98838]
      strand separated elongation complex
    6. 898255Domain d1sfoh_: 1sfo H: [98839]
      strand separated elongation complex
    7. 898256Domain d1sfoi_: 1sfo I: [98840]
      strand separated elongation complex
    8. 898257Domain d1sfoj_: 1sfo J: [98841]
      strand separated elongation complex
    9. 898258Domain d1sfok_: 1sfo K: [98842]
      strand separated elongation complex
    10. 898259Domain d1sfol_: 1sfo L: [98843]
      strand separated elongation complex
  8. Domain(s) for 1wcm:
    1. 898112Domain d1wcma_: 1wcm A: [114510]
    2. 898113Domain d1wcmb_: 1wcm B: [114511]
    3. 898114Domain d1wcmc_: 1wcm C: [114512]
    4. 898115Domain d1wcmd_: 1wcm D: [114513]
    5. 898116Domain d1wcme_: 1wcm E: [114514]
    6. 898117Domain d1wcmf_: 1wcm F: [114515]
    7. 898118Domain d1wcmg_: 1wcm G: [114516]
    8. 898119Domain d1wcmh_: 1wcm H: [114517]
    9. 898120Domain d1wcmi_: 1wcm I: [114518]
    10. 898121Domain d1wcmj_: 1wcm J: [114519]
    11. 898122Domain d1wcmk_: 1wcm K: [114520]
    12. 898123Domain d1wcml_: 1wcm L: [114521]
  9. Domain(s) for 1y1v:
    1. 898156Domain d1y1va_: 1y1v A: [116349]
    2. 898157Domain d1y1vb_: 1y1v B: [116350]
    3. 898158Domain d1y1vc_: 1y1v C: [116351]
    4. 898159Domain d1y1vd_: 1y1v D: [116352]
    5. 898160Domain d1y1ve_: 1y1v E: [116353]
    6. 898161Domain d1y1vf_: 1y1v F: [116354]
    7. 898162Domain d1y1vg_: 1y1v G: [116355]
    8. 898163Domain d1y1vh_: 1y1v H: [116356]
    9. 898164Domain d1y1vi_: 1y1v I: [116357]
    10. 898165Domain d1y1vj_: 1y1v J: [116358]
    11. 898166Domain d1y1vk_: 1y1v K: [116359]
    12. 898167Domain d1y1vl_: 1y1v L: [116360]
    13. 898168Domain d1y1vs_: 1y1v S: [116361]
  10. Domain(s) for 1y1w:
    1. 898130Domain d1y1wa_: 1y1w A: [116362]
    2. 898131Domain d1y1wb_: 1y1w B: [116363]
    3. 898132Domain d1y1wc_: 1y1w C: [116364]
    4. 898133Domain d1y1wd_: 1y1w D: [116365]
    5. 898134Domain d1y1we_: 1y1w E: [116366]
    6. 898135Domain d1y1wf_: 1y1w F: [116367]
    7. 898136Domain d1y1wg_: 1y1w G: [116368]
    8. 898137Domain d1y1wh_: 1y1w H: [116369]
    9. 898138Domain d1y1wi_: 1y1w I: [116370]
    10. 898139Domain d1y1wj_: 1y1w J: [116371]
    11. 898140Domain d1y1wk_: 1y1w K: [116372]
    12. 898141Domain d1y1wl_: 1y1w L: [116373]
  11. Domain(s) for 1y1y:
    1. 898194Domain d1y1ya_: 1y1y A: [116376]
    2. 898195Domain d1y1yb_: 1y1y B: [116377]
    3. 898196Domain d1y1yc_: 1y1y C: [116378]
    4. 898197Domain d1y1yd_: 1y1y D: [116379]
    5. 898198Domain d1y1ye_: 1y1y E: [116380]
    6. 898199Domain d1y1yf_: 1y1y F: [116381]
    7. 898200Domain d1y1yg_: 1y1y G: [116382]
    8. 898201Domain d1y1yh_: 1y1y H: [116383]
    9. 898202Domain d1y1yi_: 1y1y I: [116384]
    10. 898203Domain d1y1yj_: 1y1y J: [116385]
    11. 898204Domain d1y1yk_: 1y1y K: [116386]
    12. 898205Domain d1y1yl_: 1y1y L: [116387]
    13. 898206Domain d1y1ys_: 1y1y S: [116388]
  12. Domain(s) for 1y77:
    1. 898217Domain d1y77a_: 1y77 A: [116512]
    2. 898218Domain d1y77b_: 1y77 B: [116513]
    3. 898219Domain d1y77c_: 1y77 C: [116514]
    4. 898220Domain d1y77d_: 1y77 D: [116515]
    5. 898221Domain d1y77e_: 1y77 E: [116516]
    6. 898222Domain d1y77f_: 1y77 F: [116517]
    7. 898223Domain d1y77g_: 1y77 G: [116518]
    8. 898224Domain d1y77h_: 1y77 H: [116519]
    9. 898225Domain d1y77i_: 1y77 I: [116520]
    10. 898226Domain d1y77j_: 1y77 J: [116521]
    11. 898227Domain d1y77k_: 1y77 K: [116522]
    12. 898228Domain d1y77l_: 1y77 L: [116523]
  13. Domain(s) for 2b63:
    1. 898124Domain d2b63d1: 2b63 D:15-75 [127921]
      Other proteins in same PDB: d2b63a1, d2b63b1, d2b63c1, d2b63c2, d2b63e1, d2b63e2, d2b63f1, d2b63h1, d2b63i1, d2b63i2, d2b63j1, d2b63k1, d2b63l1
      low resulution structure
      complexed with 5bu, mg, zn
    2. 898125Domain d2b63g1: 2b63 G:1-79 [127925]
      Other proteins in same PDB: d2b63a1, d2b63b1, d2b63c1, d2b63c2, d2b63e1, d2b63e2, d2b63f1, d2b63h1, d2b63i1, d2b63i2, d2b63j1, d2b63k1, d2b63l1
      low resulution structure
      complexed with 5bu, mg, zn
  14. Domain(s) for 2b8k:
  15. Domain(s) for 2ja5:
  16. Domain(s) for 2ja6:
  17. Domain(s) for 2ja7:
    1. 898126Domain d2ja7d1: 2ja7 D:15-75 [138194]
      Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
      automatically matched to 2B63 D:15-75
      complexed with bru, mg, tt, zn
    2. 898127Domain d2ja7p1: 2ja7 P:15-75 [138210]
      Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
      automatically matched to 2B63 D:15-75
      complexed with bru, mg, tt, zn
  18. Domain(s) for 2ja8:
  19. Domain(s) for 2r7z:
    1. 898096Domain d2r7za1: 2r7z A:2-1455 [151658]
      Other proteins in same PDB: d2r7zb1, d2r7zf1, d2r7zh1, d2r7zj1, d2r7zl1
      automatically matched to d1wcma_
      complexed with cpt, mg, zn
    2. 898097Domain d2r7zd1: 2r7z D:4-221 [151660]
      Other proteins in same PDB: d2r7zb1, d2r7zf1, d2r7zh1, d2r7zj1, d2r7zl1
      automatically matched to d1y1vd_
      complexed with cpt, mg, zn
    3. 898098Domain d2r7zg1: 2r7z G:1-171 [151662]
      Other proteins in same PDB: d2r7zb1, d2r7zf1, d2r7zh1, d2r7zj1, d2r7zl1
      automatically matched to d1wcmg_
      complexed with cpt, mg, zn
    4. 898099Domain d2r7zk1: 2r7z K:1-114 [151665]
      Other proteins in same PDB: d2r7zb1, d2r7zf1, d2r7zh1, d2r7zj1, d2r7zl1
      automatically matched to d1wcmk_
      complexed with cpt, mg, zn
  20. Domain(s) for 2r92:
    1. 898100Domain d2r92a1: 2r92 A:2-1455 [151745]
      Other proteins in same PDB: d2r92b1, d2r92f1, d2r92h1, d2r92j1, d2r92l1
      automatically matched to d1wcma_
      complexed with mg, zn
    2. 898101Domain d2r92d1: 2r92 D:4-221 [151747]
      Other proteins in same PDB: d2r92b1, d2r92f1, d2r92h1, d2r92j1, d2r92l1
      automatically matched to d1y1vd_
      complexed with mg, zn
    3. 898102Domain d2r92g1: 2r92 G:1-171 [151749]
      Other proteins in same PDB: d2r92b1, d2r92f1, d2r92h1, d2r92j1, d2r92l1
      automatically matched to d1wcmg_
      complexed with mg, zn
    4. 898103Domain d2r92k1: 2r92 K:1-112 [151752]
      Other proteins in same PDB: d2r92b1, d2r92f1, d2r92h1, d2r92j1, d2r92l1
      automatically matched to d1wcmk_
      complexed with mg, zn
  21. Domain(s) for 2r93:
    1. 898104Domain d2r93a1: 2r93 A:2-1455 [151754]
      Other proteins in same PDB: d2r93b1, d2r93f1, d2r93h1, d2r93j1, d2r93l1
      automatically matched to d1wcma_
      complexed with mg, zn
    2. 898105Domain d2r93d1: 2r93 D:4-221 [151756]
      Other proteins in same PDB: d2r93b1, d2r93f1, d2r93h1, d2r93j1, d2r93l1
      automatically matched to d1y1vd_
      complexed with mg, zn
    3. 898106Domain d2r93g1: 2r93 G:1-171 [151758]
      Other proteins in same PDB: d2r93b1, d2r93f1, d2r93h1, d2r93j1, d2r93l1
      automatically matched to d1wcmg_
      complexed with mg, zn
    4. 898107Domain d2r93k1: 2r93 K:1-112 [151761]
      Other proteins in same PDB: d2r93b1, d2r93f1, d2r93h1, d2r93j1, d2r93l1
      automatically matched to d1wcmk_
      complexed with mg, zn
  22. Domain(s) for 2vum:
    1. 898108Domain d2vuma1: 2vum A:2-1455 [153548]
      Other proteins in same PDB: d2vumb1, d2vumf1, d2vumh1, d2vumj1, d2vuml1
      automatically matched to d1wcma_
      complexed with bru, ilx, mg, trx, zn
    2. 898109Domain d2vumd1: 2vum D:4-221 [153550]
      Other proteins in same PDB: d2vumb1, d2vumf1, d2vumh1, d2vumj1, d2vuml1
      automatically matched to d1y1vd_
      complexed with bru, ilx, mg, trx, zn
    3. 898110Domain d2vumg1: 2vum G:1-171 [153552]
      Other proteins in same PDB: d2vumb1, d2vumf1, d2vumh1, d2vumj1, d2vuml1
      automatically matched to d1wcmg_
      complexed with bru, ilx, mg, trx, zn
    4. 898111Domain d2vumk1: 2vum K:1-114 [153555]
      Other proteins in same PDB: d2vumb1, d2vumf1, d2vumh1, d2vumj1, d2vuml1
      automatically matched to d1wcmk_
      complexed with bru, ilx, mg, trx, zn
  23. Domain(s) for 3cqz:
    1. 898094Domain d3cqza1: 3cqz A:6-1450 [156929]
      Other proteins in same PDB: d3cqzb1, d3cqzf1, d3cqzh1, d3cqzj1, d3cqzl1
      automatically matched to d1wcma_
      complexed with ilx, trx, zn
    2. 898095Domain d3cqzk1: 3cqz K:2-114 [156934]
      Other proteins in same PDB: d3cqzb1, d3cqzf1, d3cqzh1, d3cqzj1, d3cqzl1
      automatically matched to d1wcmk_
      complexed with ilx, trx, zn

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from i.8.1.1 Complete 12-subunit RNA polymerase II complex

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from i.8.1.1 Complete 12-subunit RNA polymerase II complex: