Lineage for Protein: RNA-binding protein 8

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2951860Superfamily d.58.7: RNA-binding domain, RBD, aka RNA recognition motif (RRM) [54928] (6 families) (S)
  5. 2951861Family d.58.7.1: Canonical RBD [54929] (70 proteins)
    Pfam PF00076
    Pfam PF13893
  6. 2952138Protein RNA-binding protein 8 [89938] (2 species)

Species:

  1. 2952139Fruit fly (Drosophila melanogaster) [TaxId:7227] [89939] (3 PDB entries)
    CG8781 protein
    1. Domains for 1hl6:
      1. 2952142Domain d1hl6a_: 1hl6 A: [83609]
        Other proteins in same PDB: d1hl6b_, d1hl6d_
      2. 2952143Domain d1hl6c_: 1hl6 C: [83611]
        Other proteins in same PDB: d1hl6b_, d1hl6d_
    2. Domain for 1oo0:
      • 2952140Domain d1oo0b_: 1oo0 B: [87183]
        Other proteins in same PDB: d1oo0a_
        protein/RNA complex; complexed with bme, gol, mpd, sr
    3. Domain for 1rk8:
  2. 2952144Human (Homo sapiens) [TaxId:9606] [102978] (3 PDB entries)
    RBM8A, Y14
    1. Domains for 1p27:
      1. 2952145Domain d1p27b_: 1p27 B: [93908]
        Other proteins in same PDB: d1p27a_, d1p27c_
        protein/RNA complex
      2. 2952146Domain d1p27d_: 1p27 D: [93910]
        Other proteins in same PDB: d1p27a_, d1p27c_
        protein/RNA complex
    2. Domains for 2hyi:
      1. 2952147Domain d2hyib_: 2hyi B: [136891]
        Other proteins in same PDB: d2hyia_, d2hyic1, d2hyic2, d2hyic3, d2hyig_, d2hyii1, d2hyii2, d2hyii3
        automated match to d1p27b_
        protein/RNA complex; complexed with anp, mg
      2. 2952148Domain d2hyih_: 2hyi H: [136895]
        Other proteins in same PDB: d2hyia_, d2hyic1, d2hyic2, d2hyic3, d2hyig_, d2hyii1, d2hyii2, d2hyii3
        automated match to d1p27b_
        protein/RNA complex; complexed with anp, mg
    3. Domains for 2j0q:
      1. 2952149Domain d2j0qd1: 2j0q D:66-154 [137909]
        Other proteins in same PDB: d2j0qa1, d2j0qa2, d2j0qb1, d2j0qb2, d2j0qc1, d2j0qf1
        automatically matched to d1p27b_
        protein/RNA complex; complexed with anp, mg
      2. 2952150Domain d2j0qg1: 2j0q G:66-154 [137911]
        Other proteins in same PDB: d2j0qa1, d2j0qa2, d2j0qb1, d2j0qb2, d2j0qc1, d2j0qf1
        automatically matched to d1p27b_
        protein/RNA complex; complexed with anp, mg

More info for Protein RNA-binding protein 8 from d.58.7.1: Canonical RBD

Timeline for Protein RNA-binding protein 8 from d.58.7.1: Canonical RBD: