Lineage for Family d.38.1.5: PaaI/YdiI-like

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1409951Fold d.38: Thioesterase/thiol ester dehydrase-isomerase [54636] (1 superfamily)
    core: beta-alpha-beta(4); 2 layers: alpha/beta
  4. 1409952Superfamily d.38.1: Thioesterase/thiol ester dehydrase-isomerase [54637] (9 families) (S)
  5. 1410230Family d.38.1.5: PaaI/YdiI-like [89902] (15 proteins)

Proteins:

  1. 14102314-hydroxybenzoyl CoA thioesterase [102914] (1 species)
  2. 1410239Hypothetical protein CC3309 [143177] (1 species)
  3. 1410242Hypothetical protein HI1161 [89905] (1 species)
  4. 1410250Hypothetical protein PA1835 [143182] (1 species)
  5. 1410254Hypothetical protein PA5026 [110900] (1 species)
  6. 1410258Hypothetical protein PA5202 [143175] (1 species)
  7. 1410262Hypothetical protein PH1136 [102916] (1 species)
  8. 1410265Hypothetical protein RHA1_ro05818 [160184] (1 species)
    includes two extra N-terminal helices forming an interlocking four-helical bundle in the dimer
  9. 1410271Hypothetical protein Them2 [143179] (2 species)
    1. 1410272Species Human (Homo sapiens) [TaxId:9606] [143181] (2 PDB entries)
      Uniprot Q9NPJ3 19-139! Uniprot Q9NPJ3 3-138
    2. 1410278Species Mouse (Mus musculus) [TaxId:10090] [143180] (1 PDB entry)
      Uniprot Q9CQR4 13-139
  10. 1410280Hypothetical protein YbdB [102912] (1 species)
  11. 1410284Hypothetical protein YdiI [102910] (1 species)
  12. 1410300Phenylacetic acid degradation protein PaaI [89903] (2 species)
    1. 1410301Species Escherichia coli [TaxId:562] [89904] (2 PDB entries)
    2. 1410306Species Thermus thermophilus [TaxId:274] [102909] (1 PDB entry)
  13. 1410309Putative thioesterase SO4397 [110898] (1 species)
  14. 1410315Transcription factor FapR, C-terminal domain [143184] (1 species)
  15. 1410323automated matches [190102] (5 species)
    not a true protein
    1. 1410324Species Arthrobacter sp. [TaxId:1667] [194804] (11 PDB entries)
    2. 1410347Species Haemophilus influenzae [TaxId:727] [186964] (1 PDB entry)
    3. 1410356Species Human (Homo sapiens) [TaxId:9606] [187682] (2 PDB entries)
    4. 1410372Species Mouse (Mus musculus) [TaxId:10090] [187583] (1 PDB entry)
    5. 1410374Species Thermus thermophilus [TaxId:300852] [186824] (5 PDB entries)

More info for Family d.38.1.5: PaaI/YdiI-like

Timeline for Family d.38.1.5: PaaI/YdiI-like: