Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1643180Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 1643181Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 1643206Family d.21.1.2: PhzC/PhzF-like [89863] (4 proteins)
    Pfam PF02567
  6. 1643217Protein Hypothetical protein YddE [89864] (1 species)
  7. 1643218Species Escherichia coli [TaxId:562] [89865] (3 PDB entries)
    Uniprot P37757
    structural genomics; NESG target ET25

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1qy9:
    1. 1643219Domain d1qy9a1: 1qy9 A:3-129 [104645]
      Structural genomics target
      complexed with gol, oh
    2. 1643220Domain d1qy9a2: 1qy9 A:130-297 [104646]
      Structural genomics target
      complexed with gol, oh
    3. 1643221Domain d1qy9b1: 1qy9 B:3-129 [104647]
      Structural genomics target
      complexed with gol, oh
    4. 1643222Domain d1qy9b2: 1qy9 B:130-297 [104648]
      Structural genomics target
      complexed with gol, oh
    5. 1643223Domain d1qy9c1: 1qy9 C:2-129 [104649]
      Structural genomics target
      complexed with gol, oh
    6. 1643224Domain d1qy9c2: 1qy9 C:130-297 [104650]
      Structural genomics target
      complexed with gol, oh
    7. 1643225Domain d1qy9d1: 1qy9 D:1-129 [104651]
      Structural genomics target
      complexed with gol, oh
    8. 1643226Domain d1qy9d2: 1qy9 D:130-297 [104652]
      Structural genomics target
      complexed with gol, oh
  2. Domain(s) for 1qya:
    1. 1643227Domain d1qyaa1: 1qya A:1-129 [104653]
      Structural genomics target
    2. 1643228Domain d1qyaa2: 1qya A:130-297 [104654]
      Structural genomics target
    3. 1643229Domain d1qyab1: 1qya B:1-129 [104655]
      Structural genomics target
    4. 1643230Domain d1qyab2: 1qya B:130-297 [104656]
      Structural genomics target
  3. Domain(s) for 1sdj:
    1. 1643231Domain d1sdja1: 1sdj A:-10-129 [98807]
      structural genomics; NESG target ET25
      complexed with so4
    2. 1643232Domain d1sdja2: 1sdj A:130-299 [98808]
      structural genomics; NESG target ET25
      complexed with so4

More info for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE

Timeline for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE: