Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 857220Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 857221Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (4 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 857237Family d.21.1.2: PhzC/PhzF-like [89863] (4 proteins)
    Pfam PF02567
  6. 857248Protein Hypothetical protein YddE [89864] (1 species)
  7. 857249Species Escherichia coli [TaxId:562] [89865] (3 PDB entries)
    Uniprot P37757
    structural genomics; NESG target ET25

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1qy9:
    1. 857250Domain d1qy9a1: 1qy9 A:3-129 [104645]
      Structural genomics target
    2. 857251Domain d1qy9a2: 1qy9 A:130-297 [104646]
      Structural genomics target
    3. 857252Domain d1qy9b1: 1qy9 B:3-129 [104647]
      Structural genomics target
    4. 857253Domain d1qy9b2: 1qy9 B:130-297 [104648]
      Structural genomics target
    5. 857254Domain d1qy9c1: 1qy9 C:2-129 [104649]
      Structural genomics target
    6. 857255Domain d1qy9c2: 1qy9 C:130-297 [104650]
      Structural genomics target
    7. 857256Domain d1qy9d1: 1qy9 D:1-129 [104651]
      Structural genomics target
    8. 857257Domain d1qy9d2: 1qy9 D:130-297 [104652]
      Structural genomics target
      complexed with gol, hyd
  2. Domain(s) for 1qya:
    1. 857258Domain d1qyaa1: 1qya A:1-129 [104653]
      Structural genomics target
    2. 857259Domain d1qyaa2: 1qya A:130-297 [104654]
      Structural genomics target
    3. 857260Domain d1qyab1: 1qya B:1-129 [104655]
      Structural genomics target
    4. 857261Domain d1qyab2: 1qya B:130-297 [104656]
      Structural genomics target
  3. Domain(s) for 1sdj:
    1. 857262Domain d1sdja1: 1sdj A:-10-129 [98807]
      structural genomics; NESG target ET25
    2. 857263Domain d1sdja2: 1sdj A:130-299 [98808]
      structural genomics; NESG target ET25
      complexed with so4

More info for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE

Timeline for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE: