Lineage for Species: Thermus thermophilus

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 320172Fold c.72: Ribokinase-like [53612] (2 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 320173Superfamily c.72.1: Ribokinase-like [53613] (5 families) (S)
    has extra strand located between strands 2 and 3
  5. 320207Family c.72.1.2: Thiamin biosynthesis kinases [53620] (2 proteins)
  6. 320208Protein 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) [69589] (2 species)
  7. 320214Species Thermus thermophilus [TaxId:274] [89775] (1 PDB entry)

PDB entry in Species: Thermus thermophilus:

  • Domain(s) for 1ub0:
    • 320215Domain d1ub0a_: 1ub0 A: [88394]
      structural genomics
      complexed with dox, gol, so4

More info for Species Thermus thermophilus [TaxId:274] from c.72.1.2 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)

Timeline for Species Thermus thermophilus [TaxId:274] from c.72.1.2 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD):

  • Species Thermus thermophilus [TaxId:274] from c.72.1.2 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) is new in SCOP 1.65
  • Species Thermus thermophilus [TaxId:274] from c.72.1.2 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) appears in SCOP 1.67
  • Species Thermus thermophilus [TaxId:274] from c.72.1.2 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) appears in the current release, SCOPe 2.08