Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108664Family c.36.1.10: TK-like PP module [88760] (3 protein domains)
    different order of the modules, PP module is N-terminal, Pyr module is next to it followed by a Rossmann-like domain
  6. 2108683Protein Transketolase (TK), PP module [88761] (4 species)
  7. 2108699Species Escherichia coli [TaxId:562] [89656] (4 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1qgd:
    1. 2108706Domain d1qgda2: 1qgd A:2-332 [88368]
      Other proteins in same PDB: d1qgda1, d1qgda3, d1qgdb1, d1qgdb3
      complexed with ca, so4, tpp
    2. 2108707Domain d1qgdb2: 1qgd B:2-332 [88371]
      Other proteins in same PDB: d1qgda1, d1qgda3, d1qgdb1, d1qgdb3
      complexed with ca, so4, tpp
  2. Domain(s) for 2r5n:
    1. 2108702Domain d2r5na2: 2r5n A:2-332 [151592]
      Other proteins in same PDB: d2r5na1, d2r5na3, d2r5na4, d2r5nb1, d2r5nb3, d2r5nb4
      automated match to d1qgda2
      complexed with ca, edo, r5p, rp5, tpp
    2. 2108703Domain d2r5nb2: 2r5n B:2-332 [151595]
      Other proteins in same PDB: d2r5na1, d2r5na3, d2r5na4, d2r5nb1, d2r5nb3, d2r5nb4
      automated match to d1qgda2
      complexed with ca, edo, r5p, rp5, tpp
  3. Domain(s) for 2r8o:
    1. 2108700Domain d2r8oa2: 2r8o A:2-332 [151732]
      Other proteins in same PDB: d2r8oa1, d2r8oa3, d2r8ob1, d2r8ob3, d2r8ob4
      automated match to d1qgda2
      complexed with ca, edo, t5x
    2. 2108701Domain d2r8ob2: 2r8o B:2-332 [151735]
      Other proteins in same PDB: d2r8oa1, d2r8oa3, d2r8ob1, d2r8ob3, d2r8ob4
      automated match to d1qgda2
      complexed with ca, edo, t5x
  4. Domain(s) for 2r8p:
    1. 2108704Domain d2r8pa2: 2r8p A:2-332 [151738]
      Other proteins in same PDB: d2r8pa1, d2r8pa3, d2r8pb1, d2r8pb3, d2r8pb4
      automated match to d1qgda2
      complexed with ca, edo, t6f
    2. 2108705Domain d2r8pb2: 2r8p B:2-332 [151741]
      Other proteins in same PDB: d2r8pa1, d2r8pa3, d2r8pb1, d2r8pb3, d2r8pb4
      automated match to d1qgda2
      complexed with ca, edo, t6f

More info for Species Escherichia coli [TaxId:562] from c.36.1.10 Transketolase (TK), PP module

Timeline for Species Escherichia coli [TaxId:562] from c.36.1.10 Transketolase (TK), PP module: