Lineage for Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2150174Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2150175Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2150238Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD [89629] (2 protein domains)
    fold and dimerisation mode are similar to those of the YbeA-like family; contains additional C-terminal all-alpha subdomain

Protein Domains:

  1. 2150239tRNA(m1G37)-methyltransferase TrmD [89630] (3 species)
    1. 2150240Species Aquifex aeolicus [TaxId:63363] [102278] (1 PDB entry)
    2. 2150244Species Escherichia coli [TaxId:562] [110499] (1 PDB entry)
      Uniprot P07020
    3. 2150246Species Haemophilus influenzae [TaxId:727] [89631] (4 PDB entries)
  2. 2150251automated matches [196235] (1 species)
    not a true protein

More info for Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD

Timeline for Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD: