Lineage for Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2492420Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2492421Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2492493Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD [89629] (2 protein domains)
    fold and dimerisation mode are similar to those of the YbeA-like family; contains additional C-terminal all-alpha subdomain

Protein Domains:

  1. 2492494tRNA(m1G37)-methyltransferase TrmD [89630] (3 species)
    1. 2492495Species Aquifex aeolicus [TaxId:63363] [102278] (1 PDB entry)
    2. 2492499Species Escherichia coli [TaxId:562] [110499] (1 PDB entry)
      Uniprot P07020
    3. 2492501Species Haemophilus influenzae [TaxId:727] [89631] (4 PDB entries)
  2. 2492506automated matches [196235] (2 species)
    not a true protein
    1. 2492507Species Haemophilus influenzae [TaxId:71421] [196236] (37 PDB entries)
    2. 2492547Species Pseudomonas aeruginosa [TaxId:208963] [343276] (2 PDB entries)

More info for Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD

Timeline for Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD: