SCOPe 2.07: Protein: DJ-1

Lineage for Protein: DJ-1

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

Superfamily c.23.16: Class I glutamine amidotransferase-like [52317] (10 families)

(S)

conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures

Family c.23.16.2: DJ-1/PfpI [52325] (10 proteins)
contains a catalytic triad or dyad different from the class I GAT triad
Protein DJ-1 [89603] (1 species)
RNA-binding protein regulatory subunit

Species:

Human (Homo sapiens) [TaxId:9606] [89604] (62 PDB entries)
Uniprot Q99497
1. Domain for 1j42:
  - Domain d1j42a_: 1j42 A: [90837]
2. Domain for 1p5f:
  - Domain d1p5fa_: 1p5f A: [94142]
3. Domain for 1pdv:
  - Domain d1pdva_: 1pdv A: [88036]
4. Domains for 1pdw:
  1. Domain d1pdwa_: 1pdw A: [88037]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
  2. Domain d1pdwb_: 1pdw B: [88038]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
  3. Domain d1pdwc_: 1pdw C: [88039]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
  4. Domain d1pdwd_: 1pdw D: [88040]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
  5. Domain d1pdwe1: 1pdw E:2002-2189 [88041]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
  6. Domain d1pdwf_: 1pdw F: [88042]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
  7. Domain d1pdwg1: 1pdw G:3002-3189 [88043]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
  8. Domain d1pdwh_: 1pdw H: [88044]
    Other proteins in same PDB: d1pdwe2, d1pdwg2
5. Domains for 1pe0:
  1. Domain d1pe0a_: 1pe0 A: [88045]
    mutant
  2. Domain d1pe0b_: 1pe0 B: [88046]
    mutant
6. Domain for 1ps4:
  - Domain d1ps4a_: 1ps4 A: [302899]
    automated match to d1q2ua_
7. Domain for 1q2u:
  - Domain d1q2ua_: 1q2u A: [95642]
8. Domain for 1soa:
  - Domain d1soaa_: 1soa A: [105843]
9. Domains for 1ucf:
  1. Domain d1ucfa_: 1ucf A: [99173]
  2. Domain d1ucfb_: 1ucf B: [99174]
10. Domains for 2or3:
  1. Domain d2or3a_: 2or3 A: [139256]
    automated match to d1ps4a_
    complexed with so4
  2. Domain d2or3b_: 2or3 B: [139257]
    automated match to d1ps4a_
    complexed with so4
11. Domains for 2r1t:
  1. Domain d2r1ta_: 2r1t A: [167925]
    automated match to d1ucfa_
  2. Domain d2r1tb_: 2r1t B: [167926]
    automated match to d1ucfa_
12. Domains for 2r1u:
  1. Domain d2r1ua_: 2r1u A: [151527]
    automated match to d1pdva_
  2. Domain d2r1ub_: 2r1u B: [151528]
    automated match to d1pdva_
13. Domains for 2r1v:
  1. Domain d2r1va_: 2r1v A: [167927]
    automated match to d1ucfa_
  2. Domain d2r1vb_: 2r1v B: [167928]
    automated match to d1ucfa_
14. Domain for 2rk3:
  - Domain d2rk3a_: 2rk3 A: [168157]
    automated match to d1pdwg_
15. Domain for 2rk4:
  - Domain d2rk4a_: 2rk4 A: [168158]
    automated match to d1pdwg_
16. Domain for 2rk6:
  - Domain d2rk6a1: 2rk6 A:4-187 [168159]
    Other proteins in same PDB: d2rk6a2
    automated match to d1ps4a_
17. Domain for 3b36:
  - Domain d3b36a1: 3b36 A:4-188 [172406]
    Other proteins in same PDB: d3b36a2
    automated match to d1ps4a_
    complexed with cl, edo
18. Domain for 3b38:
  - Domain d3b38a1: 3b38 A:1-188 [172407]
    Other proteins in same PDB: d3b38a2
    automated match to d1ps4a_
    complexed with edo
19. Domain for 3b3a:
  - Domain d3b3aa1: 3b3a A:4-188 [172410]
    Other proteins in same PDB: d3b3aa2
    automated match to d1ps4a_
    complexed with cl, edo
20. Domains for 3bwe:
  1. Domain d3bwea_: 3bwe A: [155686]
    automated match to d1ps4a_
    complexed with po4
  2. Domain d3bweb_: 3bwe B: [155687]
    automated match to d1ps4a_
    complexed with po4
  3. Domain d3bwec_: 3bwe C: [155688]
    automated match to d1ps4a_
    complexed with po4
  4. Domain d3bwed_: 3bwe D: [155689]
    automated match to d1ps4a_
    complexed with po4
  5. Domain d3bwee_: 3bwe E: [155690]
    automated match to d1ps4a_
    complexed with po4
  6. Domain d3bwef_: 3bwe F: [155691]
    automated match to d1ps4a_
    complexed with po4
  7. Domain d3bweg_: 3bwe G: [155692]
    automated match to d1ps4a_
    complexed with po4
21. Domain for 3cy6:
  - Domain d3cy6a_: 3cy6 A: [173540]
    automated match to d1pdwg_
22. Domain for 3cyf:
  - Domain d3cyfa_: 3cyf A: [173543]
    automated match to d1pdwg_
23. Domain for 3cz9:
  - Domain d3cz9a_: 3cz9 A: [173561]
    automated match to d1pdwg_
    complexed with p4c
24. Domain for 3cza:
  - Domain d3czaa_: 3cza A: [173562]
    automated match to d1pdwg_
    complexed with mla
25. Domain for 3ezg:
  - Domain d3ezga_: 3ezg A: [175322]
    automated match to d1pdwg_
26. Domains for 3sf8:
  1. Domain d3sf8a1: 3sf8 A:2-189 [185364]
    Other proteins in same PDB: d3sf8a2
    automated match to d1pdwg_
  2. Domain d3sf8b_: 3sf8 B: [185365]
    Other proteins in same PDB: d3sf8a2
    automated match to d1pdwg_
27. Domain for 4bte:
  - Domain d4btea_: 4bte A: [228757]
    automated match to d1soaa_
    complexed with cu1
28. Domain for 4mnt:
  - Domain d4mnta_: 4mnt A: [237314]
    automated match to d1soaa_
    complexed with cu
29. Domain for 4mtc:
  - Domain d4mtca_: 4mtc A: [237325]
    automated match to d1q2ua_
    complexed with edo
30. Domain for 4n0m:
  - Domain d4n0ma_: 4n0m A: [266862]
    automated match to d1q2ua_
    complexed with cu, edo
31. Domain for 4n12:
  - Domain d4n12a_: 4n12 A: [237326]
    automated match to d1q2ua_
    complexed with cu, edo
32. Domain for 4ogf:
  - Domain d4ogfa_: 4ogf A: [260344]
    automated match to d2r1va_
33. Domain for 4oq4:
  - Domain d4oq4a1: 4oq4 A:4-188 [237093]
    Other proteins in same PDB: d4oq4a2
    automated match to d1q2ua_
    complexed with na
34. Domain for 4p2g:
  - Domain d4p2ga_: 4p2g A: [238482]
    automated match to d1soaa_
    complexed with 1pe, edo
35. Domain for 4p34:
  - Domain d4p34a_: 4p34 A: [238481]
    automated match to d1soaa_
    complexed with 1pe
36. Domain for 4p35:
  - Domain d4p35a_: 4p35 A: [238483]
    automated match to d1soaa_
    complexed with cl, gol, zn
37. Domain for 4p36:
  - Domain d4p36a_: 4p36 A: [238484]
    automated match to d1soaa_
    complexed with p15, zn
38. Domain for 4rkw:
  - Domain d4rkwa_: 4rkw A: [276348]
    automated match to d1p5fa_
39. Domain for 4rky:
  - Domain d4rkya_: 4rky A: [276349]
    automated match to d1p5fa_
40. Domain for 4s0z:
  - Domain d4s0za_: 4s0z A: [275635]
    automated match to d3b38a_
    complexed with act, edo
41. Domain for 4zgg:
  - Domain d4zgga1: 4zgg A:1-189 [273092]
    Other proteins in same PDB: d4zgga2
    automated match to d1q2ua_
    complexed with edo
42. Domain for 5ip5:
  - Domain d5ip5a_: 5ip5 A: [331060]
    automated match to d1p5fa_
    complexed with tla
43. Domain for 5sy6:
  - Domain d5sy6a1: 5sy6 A:4-188 [327692]
    Other proteins in same PDB: d5sy6a2
    automated match to d4s0za_
    complexed with dtt
44. Domain for 5sy9:
  - Domain d5sy9a_: 5sy9 A: [327699]
    automated match to d4s0za_
    complexed with edo; mutant
45. Domain for 5sya:
  - Domain d5syaa1: 5sya A:4-188 [327684]
    Other proteins in same PDB: d5syaa2
    automated match to d4s0za_
    complexed with edo; mutant
46. Domain for 6af5:
  - Domain d6af5a_: 6af5 A: [356702]
    automated match to d1q2ua_
    complexed with cl, isn
47. Domain for 6af7:
  - Domain d6af7a_: 6af7 A: [356699]
    automated match to d4s0za_
    complexed with 1pe, cl
48. Domain for 6af9:
  - Domain d6af9a_: 6af9 A: [356668]
    automated match to d1q2ua_
    complexed with cl, isn
49. Domain for 6afa:
  - Domain d6afaa_: 6afa A: [356800]
    automated match to d1q2ua_
    complexed with cl, isn
50. Domain for 6afb:
  - Domain d6afba_: 6afb A: [356703]
    automated match to d4s0za_
    complexed with cl, dms, isn
51. Domain for 6afc:
  - Domain d6afca_: 6afc A: [356671]
    automated match to d1q2ua_
    complexed with 72r, cl
52. Domain for 6afd:
  - Domain d6afda_: 6afd A: [356669]
    automated match to d1q2ua_
    complexed with 72s, cl
53. Domain for 6afe:
  - Domain d6afea_: 6afe A: [356714]
    automated match to d1q2ua_
    complexed with 72t, cl
54. Domain for 6aff:
  - Domain d6affa_: 6aff A: [356667]
    automated match to d1q2ua_
    complexed with 72u, cl
55. Domain for 6afg:
  - Domain d6afga_: 6afg A: [356698]
    automated match to d1q2ua_
    complexed with 72v
56. Domain for 6afh:
  - Domain d6afha_: 6afh A: [356697]
    automated match to d1q2ua_
    complexed with 73f, cl
57. Domain for 6afi:
  - Domain d6afia_: 6afi A: [356666]
    automated match to d1q2ua_
    complexed with 73d, cl
58. Domain for 6afj:
  - Domain d6afja_: 6afj A: [356841]
    automated match to d1q2ua_
    complexed with 73g, cl
59. Domain for 6afl:
  - Domain d6afla_: 6afl A: [356764]
    automated match to d1q2ua_
    complexed with 73h, cl
60. Domain for 6e5z:
  - Domain d6e5za_: 6e5z A: [355523]
    automated match to d4s0za_
    complexed with cl
61. Domain for 6m8z:
  - Domain d6m8za_: 6m8z A: [357170]
    automated match to d4s0za_
    complexed with cl, epe
62. Domain for 7c62:
  - Domain d7c62a_: 7c62 A: [388851]
    automated match to d4s0za_
    complexed with gol

More info for Protein DJ-1 from c.23.16.2: DJ-1/PfpI

Timeline for Protein DJ-1 from c.23.16.2: DJ-1/PfpI:

Protein DJ-1 from c.23.16.2: DJ-1/PfpI first appeared in SCOP 1.65
Protein DJ-1 from c.23.16.2: DJ-1/PfpI appears in SCOPe 2.06
Protein DJ-1 from c.23.16.2: DJ-1/PfpI appears in the current release, SCOPe 2.08