Lineage for Species: Archaeon Thermococcus litoralis

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 309983Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. 310019Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (3 families) (S)
    in the different families beta-barrels are similarly distorted but may vary in the number of strands
  5. 310029Family c.6.2.2: 4-alpha-glucanotransferase, N-terminal domain [89554] (1 protein)
    family 57 glycoside hydrolase; overall domain organisation is similar to that of the alpha-mannosidase family
  6. 310030Protein 4-alpha-glucanotransferase, N-terminal domain [89555] (1 species)
  7. 310031Species Archaeon Thermococcus litoralis [TaxId:2265] [89556] (3 PDB entries)

PDB entries in Species: Archaeon Thermococcus litoralis:

  1. Domain(s) for 1k1w:
  2. Domain(s) for 1k1x:
    1. 310032Domain d1k1xa3: 1k1x A:1-310 [84281]
      Other proteins in same PDB: d1k1xa1, d1k1xa2, d1k1xb1, d1k1xb2
    2. 310033Domain d1k1xb3: 1k1x B:2-310 [84284]
      Other proteins in same PDB: d1k1xa1, d1k1xa2, d1k1xb1, d1k1xb2
      complexed with ca, trs
  3. Domain(s) for 1k1y:
    1. 310034Domain d1k1ya3: 1k1y A:1-310 [84287]
      Other proteins in same PDB: d1k1ya1, d1k1ya2, d1k1yb1, d1k1yb2
    2. 310035Domain d1k1yb3: 1k1y B:2-310 [84290]
      Other proteins in same PDB: d1k1ya1, d1k1ya2, d1k1yb1, d1k1yb2
      complexed with acr, ca, mal, trs

More info for Species Archaeon Thermococcus litoralis [TaxId:2265] from c.6.2.2 4-alpha-glucanotransferase, N-terminal domain

Timeline for Species Archaeon Thermococcus litoralis [TaxId:2265] from c.6.2.2 4-alpha-glucanotransferase, N-terminal domain:

  • Species Archaeon Thermococcus litoralis [TaxId:2265] from c.6.2.2 4-alpha-glucanotransferase, N-terminal domain is new in SCOP 1.65
  • Species Archaeon Thermococcus litoralis [TaxId:2265] from c.6.2.2 4-alpha-glucanotransferase, N-terminal domain appears in SCOP 1.67
  • Species Archaeon Thermococcus litoralis [TaxId:2265] from c.6.2.2 4-alpha-glucanotransferase, N-terminal domain appears in the current release, SCOPe 2.08, called Species Thermococcus litoralis [TaxId:2265] from c.6.2.2 4-alpha-glucanotransferase, N-terminal domain