SCOPe 2.08: Protein: Beta-1,4-galactanase

Lineage for Protein: Beta-1,4-galactanase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)
Family c.1.8.3: beta-glycanases [51487] (27 proteins)
consist of a number of sequence families
Protein Beta-1,4-galactanase [89469] (4 species)

Species:

Bacillus licheniformis [TaxId:1402] [117367] (4 PDB entries)
Uniprot Q65CX5 36-422 ! Uniprot Q65CX5 28-424
1. Domains for 1r8l:
  1. Domain d1r8la_: 1r8l A: [111718]
    complexed with ca
  2. Domain d1r8lb_: 1r8l B: [111719]
    complexed with ca
2. Domains for 1ur0:
  1. Domain d1ur0a_: 1ur0 A: [113400]
    complexed with ca, pge
  2. Domain d1ur0b_: 1ur0 B: [113401]
    complexed with ca, pge
3. Domains for 1ur4:
  1. Domain d1ur4a_: 1ur4 A: [113402]
    complexed with ca, peg, pge
  2. Domain d1ur4b_: 1ur4 B: [113403]
    complexed with ca, peg, pge
4. Domain for 2ccr:
  - Domain d2ccra1: 2ccr A:11-397 [130253]
    Other proteins in same PDB: d2ccrb_
    complexed with ca, pge
Fungus (Aspergillus aculeatus) [TaxId:5053] [89470] (3 PDB entries)
1. Domain for 1fhl:
  - Domain d1fhla_: 1fhl A: [83252]
2. Domain for 1fob:
  - Domain d1foba_: 1fob A: [83255]
    complexed with ca
3. Domains for 6q3r:
  1. Domain d6q3ra_: 6q3r A: [371296]
    automated match to d1fhla_
    complexed with act, ca, edo, peg, pg4, pg6, pge
  2. Domain d6q3rb_: 6q3r B: [371551]
    automated match to d1fhla_
    complexed with act, ca, edo, peg, pg4, pg6, pge
Fungus (Humicola insolens) [TaxId:34413] [89472] (1 PDB entry)
- Domain for 1hjq:
  - Domain d1hjqa_: 1hjq A: [83491]
    complexed with nag
Thielavia heterothallica, aka Myceliophthora thermophila [TaxId:78579] [89471] (2 PDB entries)
Myceliophthora thermophila is the anamorph name whilst Thielavia heterothallica is the teleomorph name
1. Domains for 1hjs:
  1. Domain d1hjsa_: 1hjs A: [83492]
    complexed with epe, nag, peg, so4
  2. Domain d1hjsb_: 1hjs B: [83493]
    complexed with epe, nag, peg, so4
  3. Domain d1hjsc_: 1hjs C: [83494]
    complexed with epe, nag, peg, so4
  4. Domain d1hjsd_: 1hjs D: [83495]
    complexed with epe, nag, peg, so4
2. Domains for 1hju:
  1. Domain d1hjua_: 1hju A: [83496]
    complexed with nag, peg, so4, trs
  2. Domain d1hjub_: 1hju B: [83497]
    complexed with nag, peg, so4, trs
  3. Domain d1hjuc_: 1hju C: [83498]
    complexed with nag, peg, so4, trs
  4. Domain d1hjud_: 1hju D: [83499]
    complexed with nag, peg, so4, trs

More info for Protein Beta-1,4-galactanase from c.1.8.3: beta-glycanases

Timeline for Protein Beta-1,4-galactanase from c.1.8.3: beta-glycanases:

Protein Beta-1,4-galactanase from c.1.8.3: beta-glycanases first appeared in SCOP 1.65
Protein Beta-1,4-galactanase from c.1.8.3: beta-glycanases appears in SCOPe 2.07