Class c: Alpha and beta proteins (a/b) [51349] (121 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.6: PLP-binding barrel [51419] (2 families) circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand |
Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins) |
Protein Diaminopimelate decarboxylase LysA [89457] (1 species) most similar to eukaryotic ODC |
Species Mycobacterium tuberculosis [TaxId:1773] [89458] (2 PDB entries) |
Domain d1hkva2: 1hkv A:46-310 [83560] Other proteins in same PDB: d1hkva1, d1hkvb1 |
Domain d1hkvb2: 1hkv B:46-310 [83562] Other proteins in same PDB: d1hkva1, d1hkvb1 complexed with lys, plp |
Domain d1hkwa2: 1hkw A:46-310 [83564] Other proteins in same PDB: d1hkwa1, d1hkwb1 |
Domain d1hkwb2: 1hkw B:46-310 [83566] Other proteins in same PDB: d1hkwa1, d1hkwb1 complexed with mse, so4 |
Timeline for Species Mycobacterium tuberculosis [TaxId:1773] from c.1.6.1 Diaminopimelate decarboxylase LysA: