Lineage for Protein: Isopentenyl-diphosphate delta-isomerase

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2827845Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) (S)
  5. 2827846Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)
  6. 2828174Protein Isopentenyl-diphosphate delta-isomerase [89454] (3 species)

Species:

  1. 2828175Bacillus subtilis [TaxId:1423] [89455] (2 PDB entries)
    1. Domains for 1p0k:
      1. 2828176Domain d1p0ka_: 1p0k A: [87648]
        complexed with po4
        has additional insertions and/or extensions that are not grouped together
      2. 2828177Domain d1p0kb_: 1p0k B: [87649]
        complexed with po4
        has additional insertions and/or extensions that are not grouped together
    2. Domains for 1p0n:
      1. 2828178Domain d1p0na_: 1p0n A: [87651]
        complexed with fmn
        has additional insertions and/or extensions that are not grouped together
      2. 2828179Domain d1p0nb_: 1p0n B: [87652]
        complexed with fmn
        has additional insertions and/or extensions that are not grouped together
  2. 2828180Thermus thermophilus HB8 [TaxId:300852] [159377] (1 PDB entry)
    • Domains for 3dh7:
      1. 2828181Domain d3dh7a_: 3dh7 A: [157721]
        automated match to d1vcfa1
        complexed with fmn, pop

        has additional insertions and/or extensions that are not grouped together
      2. 2828182Domain d3dh7b_: 3dh7 B: [157722]
        automated match to d1vcfa1
        complexed with fmn, pop

        has additional insertions and/or extensions that are not grouped together
      3. 2828183Domain d3dh7c_: 3dh7 C: [157723]
        automated match to d1vcfa1
        complexed with fmn, pop

        has additional insertions and/or extensions that are not grouped together
      4. 2828184Domain d3dh7d_: 3dh7 D: [157724]
        automated match to d1vcfa1
        complexed with fmn, pop

        has additional insertions and/or extensions that are not grouped together
  3. 2828185Thermus thermophilus [TaxId:274] [141760] (1 PDB entry)
    Uniprot Q53W52 23-332
    • Domains for 1vcf:
      1. 2828186Domain d1vcfa1: 1vcf A:23-332 [119974]
        complexed with cd, fmn
        has additional insertions and/or extensions that are not grouped together
      2. 2828187Domain d1vcfb_: 1vcf B: [119975]
        automated match to d1vcfa1
        complexed with cd, fmn

        has additional insertions and/or extensions that are not grouped together

More info for Protein Isopentenyl-diphosphate delta-isomerase from c.1.4.1: FMN-linked oxidoreductases

Timeline for Protein Isopentenyl-diphosphate delta-isomerase from c.1.4.1: FMN-linked oxidoreductases: