SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Species: Mycobacterium tuberculosis [TaxId: 1773]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058388Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (3 superfamilies)
    barrel, closed; n=6, S=8; greek-key
  4. 2058686Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families) (S)
    the barrel is decorated with additional structures
  5. 2058722Family b.49.2.3: Eukaryotic ODC-like [88683] (2 protein domains)
    barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel
  6. 2058723Protein Diaminopimelate decarboxylase LysA [89350] (3 species)
  7. 2058734Species Mycobacterium tuberculosis [TaxId:1773] [89351] (2 PDB entries)

PDB entries in Species: Mycobacterium tuberculosis [TaxId: 1773]:

  1. Domain(s) for 1hkv:
    1. 2058735Domain d1hkva1: 1hkv A:2-45,A:311-447 [83559]
      Other proteins in same PDB: d1hkva2, d1hkvb2
      complexed with lys, plp
    2. 2058736Domain d1hkvb1: 1hkv B:2-45,B:311-447 [83561]
      Other proteins in same PDB: d1hkva2, d1hkvb2
      complexed with lys, plp
  2. Domain(s) for 1hkw:
    1. 2058737Domain d1hkwa1: 1hkw A:2-45,A:311-447 [83563]
      Other proteins in same PDB: d1hkwa2, d1hkwb2
      complexed with so4
    2. 2058738Domain d1hkwb1: 1hkw B:3-45,B:311-446 [83565]
      Other proteins in same PDB: d1hkwa2, d1hkwb2
      complexed with so4

More info for Species Mycobacterium tuberculosis [TaxId:1773] from b.49.2.3 Diaminopimelate decarboxylase LysA

Timeline for Species Mycobacterium tuberculosis [TaxId:1773] from b.49.2.3 Diaminopimelate decarboxylase LysA: