Class b: All beta proteins [48724] (177 folds) |
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily) barrel, closed; n=6, S=8; greek-key duplication: consists of two domains of the same fold |
Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) |
Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 proteins) |
Protein Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (6 species) contains an extra alpha-helical domain |
Species SARS coronavirus [TaxId:227859] [89349] (71 PDB entries) |
Domain d1q2wa_: 1q2w A: [88355] Other proteins in same PDB: d1q2wb2 complexed with mpd |
Domain d1q2wb1: 1q2w B:1-301 [88356] Other proteins in same PDB: d1q2wb2 complexed with mpd |
Domain d1uj1a_: 1uj1 A: [99450] |
Domain d1uj1b_: 1uj1 B: [99451] |
Domain d1uk2a_: 1uk2 A: [99481] |
Domain d1uk2b_: 1uk2 B: [99482] |
Domain d1uk3a_: 1uk3 A: [99483] |
Domain d1uk3b_: 1uk3 B: [99484] |
Domain d1uk4a_: 1uk4 A: [99485] complexed with ato |
Domain d1uk4b_: 1uk4 B: [99486] complexed with ato |
Domain d1z1ia_: 1z1i A: [162356] automated match to d1uj1b_ |
Domain d1z1ja_: 1z1j A: [162357] automated match to d1uj1b_ mutant |
Domain d1z1jb_: 1z1j B: [162358] automated match to d1uj1b_ mutant |
Domain d2a5aa_: 2a5a A: [162692] automated match to d1uj1b_ complexed with cl, edo |
Domain d2a5ia_: 2a5i A: [162693] automated match to d1uj1b_ complexed with azp, edo, gol |
Domain d2a5ka_: 2a5k A: [162694] automated match to d1uj1b_ complexed with azp |
Domain d2a5kb_: 2a5k B: [162695] automated match to d1uj1b_ complexed with azp |
Domain d2alva1: 2alv A:2-301 [126982] automatically matched to d1q2wb_ complexed with cy6 |
Domain d2c3sa_: 2c3s A: [163241] automated match to d1uj1b_ |
Domain d2duca_: 2duc A: [146586] automated match to d1uj1b_ |
Domain d2ducb_: 2duc B: [146587] automated match to d1uj1b_ |
Domain d2gt7a_: 2gt7 A: [164833] automated match to d1uj1b_ complexed with mes |
Domain d2gt7b_: 2gt7 B: [164834] automated match to d1uj1b_ complexed with mes |
Domain d2gt8a_: 2gt8 A: [164835] automated match to d1uj1b_ |
Domain d2gtba_: 2gtb A: [164836] automated match to d1uj1b_ complexed with acy, azp |
Domain d2gx4a_: 2gx4 A: [164869] automated match to d1uj1b_ complexed with nol |
Domain d2gz7a_: 2gz7 A: [164878] automated match to d1uj1b_ complexed with d3f |
Domain d2gz8a_: 2gz8 A: [164879] automated match to d1uj1b_ complexed with f3f |
Domain d2gz9a_: 2gz9 A: [164880] automated match to d1uj1b_ |
Domain d2h2za_: 2h2z A: [164924] automated match to d1uj1b_ |
Domain d2hoba_: 2hob A: [165177] automated match to d1uj1b_ |
Domain d2op9a2: 2op9 A:1-301 [148961] Other proteins in same PDB: d2op9a3 automated match to d1q2wb_ complexed with wr1 |
Domain d2op9b_: 2op9 B: [148962] Other proteins in same PDB: d2op9a3 automated match to d1q2wb_ complexed with wr1 |
Domain d2pwxa_: 2pwx A: [167318] automated match to d1uj1b_ mutant |
Domain d2q6ga_: 2q6g A: [167455] automated match to d1uj1b_ mutant |
Domain d2q6gb_: 2q6g B: [167456] automated match to d1uj1b_ mutant |
Domain d2qc2a1: 2qc2 A:1-304 [167515] Other proteins in same PDB: d2qc2a2 automated match to d1uj1b_ mutant |
Domain d2qc2b_: 2qc2 B: [167516] Other proteins in same PDB: d2qc2a2 automated match to d1uj1b_ mutant |
Domain d2qcya_: 2qcy A: [167522] automated match to d1uj1b_ mutant |
Domain d2qiqa2: 2qiq A:2-301 [150811] Other proteins in same PDB: d2qiqa3 automated match to d1q2wb_ complexed with cyv |
Domain d2v6na_: 2v6n A: [152716] automated match to d1uj1b_ complexed with mes, so4, xp1 |
Domain d2z3ca_: 2z3c A: [153983] automated match to d1uj1b_ complexed with gol |
Domain d2z3da_: 2z3d A: [153984] automated match to d1uj1b_ complexed with gol |
Domain d2z3ea_: 2z3e A: [153985] automated match to d1uj1b_ complexed with gol |
Domain d2z94a_: 2z94 A: [154232] automated match to d1uj1b_ complexed with tld, zn |
Domain d2z9ga_: 2z9g A: [154241] automated match to d1uj1b_ protein/RNA complex; complexed with bnz, hg |
Domain d2z9ja_: 2z9j A: [154254] automated match to d1uj1b_ protein/RNA complex; complexed with dms, dtz |
Domain d2z9jb_: 2z9j B: [154255] automated match to d1uj1b_ protein/RNA complex; complexed with dms, dtz |
Domain d2z9ka_: 2z9k A: [154256] automated match to d1uj1b_ protein/RNA complex; complexed with dms, doz |
Domain d2z9kb_: 2z9k B: [154257] automated match to d1uj1b_ protein/RNA complex; complexed with dms, doz |
Domain d2z9la_: 2z9l A: [154258] automated match to d1uj1b_ complexed with daz, dms |
Domain d2z9lb_: 2z9l B: [154259] automated match to d1uj1b_ complexed with daz, dms |
Domain d2zu4a_: 2zu4 A: [171528] automated match to d1uj1b_ complexed with zu3 |
Domain d2zu5a_: 2zu5 A: [171529] automated match to d1uj1b_ complexed with zu5 |
Domain d3atwa_: 3atw A: [172333] automated match to d1uj1b_ |
Domain d3atwb_: 3atw B: [172334] automated match to d1uj1b_ |
Domain d3avza_: 3avz A: [172358] automated match to d1uj1b_ |
Domain d3aw0a_: 3aw0 A: [172359] automated match to d1uj1b_ |
Domain d3aw1a_: 3aw1 A: [172360] automated match to d1uj1b_ mutant |
Domain d3aw1b_: 3aw1 B: [172361] automated match to d1uj1b_ mutant |
Domain d3d62a_: 3d62 A: [157411] automated match to d1q2wb_ complexed with 959 |
Domain d3f9ea_: 3f9e A: [175590] automated match to d1uj1b_ mutant |
Domain d3f9fa_: 3f9f A: [175591] automated match to d1uj1b_ mutant |
Domain d3f9fb_: 3f9f B: [175592] automated match to d1uj1b_ mutant |
Domain d3f9ga_: 3f9g A: [175593] automated match to d1q2wb_ mutant |
Domain d3f9gb_: 3f9g B: [175594] automated match to d1q2wb_ mutant |
Domain d3f9ha_: 3f9h A: [175595] automated match to d1uj1b_ mutant |
Domain d3f9hb_: 3f9h B: [175596] automated match to d1uj1b_ mutant |
Domain d3fzda_: 3fzd A: [176209] automated match to d1q2wb_ mutant |
Domain d3m3sa_: 3m3s A: [180804] automated match to d1uj1b_ mutant |
Domain d3m3sb_: 3m3s B: [180805] automated match to d1uj1b_ mutant |
Domain d3sn8a_: 3sn8 A: [185443] automated match to d1uj1b_ complexed with s89 |
Domain d3snaa_: 3sna A: [249529] automated match to d2q6gb_ |
Domain d3snba_: 3snb A: [185444] automated match to d1uj1b_ |
Domain d3snca_: 3snc A: [185445] automated match to d1uj1b_ complexed with dms |
Domain d3snda_: 3snd A: [185446] automated match to d1uj1b_ complexed with mrd |
Domain d3sndb_: 3snd B: [185447] automated match to d1uj1b_ complexed with mrd |
Domain d3snea_: 3sne A: [185448] automated match to d1uj1b_ complexed with mes |
Domain d3szna_: 3szn A: [216623] automated match to d2duca_ complexed with g75 |
Domain d3tita_: 3tit A: [216831] automated match to d2duca_ complexed with g81 |
Domain d3tiua_: 3tiu A: [216832] automated match to d2duca_ complexed with dms, g82 |
Domain d3tnsa_: 3tns A: [216906] automated match to d2duca_ complexed with g83 |
Domain d3tnta_: 3tnt A: [193531] automated match to d1z1ja_ complexed with g85 |
Domain d3v3ma_: 3v3m A: [217630] automated match to d2duca_ complexed with 0en, dms |
Domain d3vb3a_: 3vb3 A: [217737] automated match to d1uj1b_ complexed with edo, peg |
Domain d3vb3b_: 3vb3 B: [217738] automated match to d2duca_ complexed with edo, peg |
Domain d4hi3a_: 4hi3 A: [196960] automated match to d1z1ja_ mutant |
Domain d4hi3b_: 4hi3 B: [197388] automated match to d1z1ja_ mutant |
Domain d4mdsa1: 4mds A:1-302 [228110] Other proteins in same PDB: d4mdsa2 automated match to d3tnta_ complexed with 23h, dms |
Domain d4twwa_: 4tww A: [309672] automated match to d1z1ja_ complexed with 3a7 |
Domain d4twwb_: 4tww B: [309673] automated match to d1z1ja_ complexed with 3a7 |
Domain d4twxa_: 4twx A: [309674] automated match to d1z1ja_ complexed with 3a4 |
Domain d4twya_: 4twy A: [309675] automated match to d1z1ja_ complexed with 3bl |
Domain d4wy3a_: 4wy3 A: [309925] automated match to d1z1ja_ complexed with 3x5 |
Domain d5c5na_: 5c5n A: [318789] automated match to d1z1ja_ complexed with slh |
Domain d5c5oa_: 5c5o A: [318687] automated match to d1z1ja_ complexed with sdj |
Domain d5c5ob_: 5c5o B: [318792] automated match to d1z1ja_ complexed with sdj |
Timeline for Species SARS coronavirus [TaxId:227859] from b.47.1.4 Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2):