Lineage for Protein: Carmovirus coat protein

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2821496Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2821778Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2822375Family b.121.4.7: Tombusviridae-like VP [88643] (5 proteins)
  6. 2822376Protein Carmovirus coat protein [89228] (1 species)

Species:

  • 2822377CarMV (Carnation mottle virus) [TaxId:11986] [89229] (1 PDB entry)
    • Domains for 1opo:
      1. 2822378Domain d1opoa_: 1opo A: [87240]
        complexed with ca, so4
        multiple common domains: applies to families that are inconsistently divided into domains
      2. 2822379Domain d1opob_: 1opo B: [87241]
        complexed with ca, so4
        multiple common domains: applies to families that are inconsistently divided into domains
      3. 2822380Domain d1opoc_: 1opo C: [87242]
        complexed with ca, so4
        multiple common domains: applies to families that are inconsistently divided into domains

More info for Protein Carmovirus coat protein from b.121.4.7: Tombusviridae-like VP

Timeline for Protein Carmovirus coat protein from b.121.4.7: Tombusviridae-like VP: