Lineage for Species: CPMV (Cowpea mosaic virus) [TaxId: 12264]

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 966111Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 966284Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 966566Family b.121.4.2: Comoviridae-like VP [88636] (2 proteins)
    duplication: mature coat protein consists of three similar domains that can be in a single chain or in two separate chains
  6. 966567Protein Comovirus coat proteins (VP37 and VP23) [49627] (2 species)
    chain 1 is one-domain VP23; chain 2 is two-domain VP37
  7. 966578Species CPMV (Cowpea mosaic virus) [TaxId:12264] [89227] (2 PDB entries)

PDB entries in Species: CPMV (Cowpea mosaic virus) [TaxId: 12264]:

  1. Domain(s) for 1ny7:
    1. 966579Domain d1ny711: 1ny7 1:1-189 [86398]
    2. 966580Domain d1ny721: 1ny7 2:1-182 [86399]
    3. 966581Domain d1ny722: 1ny7 2:183-369 [86400]
  2. Domain(s) for 2bfu:
    1. 966582Domain d2bful1: 2bfu L:1-182 [128453]
      automatically matched to d1ny721
    2. 966583Domain d2bful2: 2bfu L:183-369 [128454]
      automatically matched to d1ny722
    3. 966584Domain d2bfus1: 2bfu S:1-189 [128455]
      automatically matched to d1ny711

More info for Species CPMV (Cowpea mosaic virus) [TaxId:12264] from b.121.4.2 Comovirus coat proteins (VP37 and VP23)

Timeline for Species CPMV (Cowpea mosaic virus) [TaxId:12264] from b.121.4.2 Comovirus coat proteins (VP37 and VP23):