Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.08
  2. 3039230Class h: Coiled coil proteins [57942] (7 folds)
  3. 3039231Fold h.1: Parallel coiled-coil [57943] (41 superfamilies)
    this is not a true fold; includes oligomers of shorter identical helices
  4. 3040219Superfamily h.1.15: SNARE fusion complex [58038] (2 families) (S)
    tetrameric parallel coiled coil
  5. 3040220Family h.1.15.1: SNARE fusion complex [58039] (12 proteins)
  6. 3040250Protein Synaptosomal-associated protein SNAP-25 [88915] (3 species)
    provides up to two different helical regions to synaptic fusion complexes
  7. 3040264Species Norway rat (Rattus norvegicus) [TaxId:10116] [88916] (8 PDB entries)
    Uniprot P13795 7-83; 142-204 # identical sequences to human species

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1jth:
    1. 3040273Domain d1jtha_: 1jth A: [67270]
      Other proteins in same PDB: d1jthb_, d1jthd_
      complex with syntaxin fragments
    2. 3040274Domain d1jthc_: 1jth C: [67272]
      Other proteins in same PDB: d1jthb_, d1jthd_
      complex with syntaxin fragments
  2. Domain(s) for 1n7s:
    1. 3040265Domain d1n7sc1: 1n7s C:7-83 [80273]
      Other proteins in same PDB: d1n7sa1, d1n7sa2, d1n7sb1, d1n7sb2, d1n7sc2, d1n7sd2
      complex with synaptobrevin and syntaxin fragments
      complexed with ca, mpd
    2. 3040266Domain d1n7sd1: 1n7s D:141-204 [80274]
      Other proteins in same PDB: d1n7sa1, d1n7sa2, d1n7sb1, d1n7sb2, d1n7sc2, d1n7sd2
      complex with synaptobrevin and syntaxin fragments
      complexed with ca, mpd
  3. Domain(s) for 1sfc:
    1. 3040279Domain d1sfcc_: 1sfc C: [45645]
      Other proteins in same PDB: d1sfca_, d1sfcb_, d1sfce_, d1sfcf_, d1sfci_, d1sfcj_
      complex with synaptobrevin and syntaxin fragments
      complexed with mpd, sr
    2. 3040280Domain d1sfcd_: 1sfc D: [45646]
      Other proteins in same PDB: d1sfca_, d1sfcb_, d1sfce_, d1sfcf_, d1sfci_, d1sfcj_
      complex with synaptobrevin and syntaxin fragments
      complexed with mpd, sr
    3. 3040281Domain d1sfcg_: 1sfc G: [45649]
      Other proteins in same PDB: d1sfca_, d1sfcb_, d1sfce_, d1sfcf_, d1sfci_, d1sfcj_
      complex with synaptobrevin and syntaxin fragments
      complexed with mpd, sr
    4. 3040282Domain d1sfch_: 1sfc H: [45650]
      Other proteins in same PDB: d1sfca_, d1sfcb_, d1sfce_, d1sfcf_, d1sfci_, d1sfcj_
      complex with synaptobrevin and syntaxin fragments
      complexed with mpd, sr
    5. 3040283Domain d1sfck_: 1sfc K: [45653]
      Other proteins in same PDB: d1sfca_, d1sfcb_, d1sfce_, d1sfcf_, d1sfci_, d1sfcj_
      complex with synaptobrevin and syntaxin fragments
      complexed with mpd, sr
    6. 3040284Domain d1sfcl_: 1sfc L: [45654]
      Other proteins in same PDB: d1sfca_, d1sfcb_, d1sfce_, d1sfcf_, d1sfci_, d1sfcj_
      complex with synaptobrevin and syntaxin fragments
      complexed with mpd, sr
  4. Domain(s) for 1urq:
    1. 3040275Domain d1urqc_: 1urq C: [107996]
      Other proteins in same PDB: d1urqa_, d1urqb_, d1urqd2
    2. 3040276Domain d1urqd1: 1urq D:141-199 [107997]
      Other proteins in same PDB: d1urqa_, d1urqb_, d1urqd2
  5. Domain(s) for 5low:
    1. 3040285Domain d5lowd1: 5low D:7-72 [335642]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1sfck_
      complexed with ca, gol
    2. 3040286Domain d5lowe_: 5low E: [335651]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1kild_
      complexed with ca, gol
    3. 3040287Domain d5lowf_: 5low F: [335680]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1sfck_
      complexed with ca, gol
    4. 3040288Domain d5lowg1: 5low G:141-199 [335649]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1kild_
      complexed with ca, gol
    5. 3040289Domain d5lowk1: 5low K:7-74 [335907]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1sfck_
      complexed with ca, gol
    6. 3040290Domain d5lowl_: 5low L: [335787]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1kild_
      complexed with ca, gol
    7. 3040291Domain d5lowm_: 5low M: [335895]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1sfck_
      complexed with ca, gol
    8. 3040292Domain d5lown1: 5low N:141-198 [335903]
      Other proteins in same PDB: d5lowa_, d5lowb_, d5lowc_, d5lowd2, d5lowg2, d5lowh_, d5lowi_, d5lowj_, d5lowk2, d5lown2
      automated match to d1kild_
      complexed with ca, gol
  6. Domain(s) for 5w5c:
    1. 3040271Domain d5w5cc_: 5w5c C: [338406]
      Other proteins in same PDB: d5w5cb_, d5w5cf1, d5w5cf2
      automated match to d1sfck_
      complexed with gol, mg
    2. 3040272Domain d5w5cd_: 5w5c D: [338389]
      Other proteins in same PDB: d5w5cb_, d5w5cf1, d5w5cf2
      automated match to d1sfcl_
      complexed with gol, mg
  7. Domain(s) for 5w5d:
    1. 3040277Domain d5w5dc_: 5w5d C: [338366]
      Other proteins in same PDB: d5w5db_, d5w5df_
      automated match to d1sfck_
      complexed with mg
    2. 3040278Domain d5w5dd_: 5w5d D: [338343]
      Other proteins in same PDB: d5w5db_, d5w5df_
      automated match to d1sfcl_
      complexed with mg
  8. Domain(s) for 6wvw:
    1. 3040267Domain d6wvwc_: 6wvw C: [402751]
      Other proteins in same PDB: d6wvwa_, d6wvwb_, d6wvwe1, d6wvwe2, d6wvwf_
      automated match to d2n1tc_
      complexed with ca, mpd
    2. 3040268Domain d6wvwd_: 6wvw D: [402741]
      Other proteins in same PDB: d6wvwa_, d6wvwb_, d6wvwe1, d6wvwe2, d6wvwf_
      automated match to d1sfcl_
      complexed with ca, mpd
    3. 3040269Domain d6wvwg_: 6wvw G: [402733]
      Other proteins in same PDB: d6wvwa_, d6wvwb_, d6wvwe1, d6wvwe2, d6wvwf_
      automated match to d2n1tc_
      complexed with ca, mpd
    4. 3040270Domain d6wvwh_: 6wvw H: [402806]
      Other proteins in same PDB: d6wvwa_, d6wvwb_, d6wvwe1, d6wvwe2, d6wvwf_
      automated match to d1sfcl_
      complexed with ca, mpd

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from h.1.15.1 Synaptosomal-associated protein SNAP-25

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from h.1.15.1 Synaptosomal-associated protein SNAP-25: