Lineage for Species: Archaeon Pyrococcus horikoshii

  1. Root: SCOP 1.67
  2. 405194Class d: Alpha and beta proteins (a+b) [53931] (260 folds)
  3. 408884Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 409301Superfamily d.17.6: Pre-PUA domain [88802] (2 families) (S)
    this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
  5. 409302Family d.17.6.1: Archaeosine tRNA-guanine transglycosylase, C2 domain [88803] (1 protein)
  6. 409303Protein Archaeosine tRNA-guanine transglycosylase, C2 domain [88804] (1 species)
    the second of the 3 additional C-terminal domains to the TGT-like domain, also includes "linker" C1 domain
  7. 409304Species Archaeon Pyrococcus horikoshii [TaxId:53953] [88805] (4 PDB entries)

PDB entries in Species: Archaeon Pyrococcus horikoshii:

  1. Domain(s) for 1iq8:
    1. 409305Domain d1iq8a4: 1iq8 A:361-505 [83075]
      Other proteins in same PDB: d1iq8a1, d1iq8a3, d1iq8b1, d1iq8b3
    2. 409306Domain d1iq8b4: 1iq8 B:361-505 [83077]
      Other proteins in same PDB: d1iq8a1, d1iq8a3, d1iq8b1, d1iq8b3
      complexed with mg, zn
  2. Domain(s) for 1it7:
    1. 409307Domain d1it7a4: 1it7 A:361-505 [83079]
      Other proteins in same PDB: d1it7a1, d1it7a3, d1it7b1, d1it7b3
    2. 409308Domain d1it7b4: 1it7 B:361-505 [83081]
      Other proteins in same PDB: d1it7a1, d1it7a3, d1it7b1, d1it7b3
      complexed with gun, mg, zn
  3. Domain(s) for 1it8:
    1. 409309Domain d1it8a4: 1it8 A:361-505 [83083]
      Other proteins in same PDB: d1it8a1, d1it8a3, d1it8b1, d1it8b3
    2. 409310Domain d1it8b4: 1it8 B:361-505 [83085]
      Other proteins in same PDB: d1it8a1, d1it8a3, d1it8b1, d1it8b3
      complexed with mg, pq0, zn
  4. Domain(s) for 1j2b:
    1. 409311Domain d1j2ba3: 1j2b A:361-505 [84012]
      Other proteins in same PDB: d1j2ba1, d1j2ba2, d1j2bb1, d1j2bb2
    2. 409312Domain d1j2bb3: 1j2b B:361-505 [84015]
      Other proteins in same PDB: d1j2ba1, d1j2ba2, d1j2bb1, d1j2bb2
      complexed with mg, zn

More info for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.17.6.1 Archaeosine tRNA-guanine transglycosylase, C2 domain

Timeline for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.17.6.1 Archaeosine tRNA-guanine transglycosylase, C2 domain: