Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2161468Fold d.17: Cystatin-like [54402] (7 superfamilies)
    Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet
  4. 2162891Superfamily d.17.6: Pre-PUA domain [88802] (5 families) (S)
    this domain is found in association with the PUA domain in the C-terminal region of Archaeosine tRNA-guanine transglycosylase and related stand-alone proteins
  5. 2162892Family d.17.6.1: Archaeosine tRNA-guanine transglycosylase, C2 domain [88803] (1 protein)
  6. 2162893Protein Archaeosine tRNA-guanine transglycosylase, C2 domain [88804] (1 species)
    the second of the 3 additional C-terminal domains to the TGT-like domain, also includes "linker" C1 domain
  7. 2162894Species Pyrococcus horikoshii [TaxId:53953] [88805] (4 PDB entries)

PDB entries in Species: Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1iq8:
    1. 2162895Domain d1iq8a4: 1iq8 A:361-505 [83075]
      Other proteins in same PDB: d1iq8a1, d1iq8a3, d1iq8b1, d1iq8b3
      complexed with mg, zn
    2. 2162896Domain d1iq8b4: 1iq8 B:361-505 [83077]
      Other proteins in same PDB: d1iq8a1, d1iq8a3, d1iq8b1, d1iq8b3
      complexed with mg, zn
  2. Domain(s) for 1it7:
    1. 2162897Domain d1it7a4: 1it7 A:361-505 [83079]
      Other proteins in same PDB: d1it7a1, d1it7a3, d1it7b1, d1it7b3
      protein/RNA complex; complexed with gun, mg, zn
    2. 2162898Domain d1it7b4: 1it7 B:361-505 [83081]
      Other proteins in same PDB: d1it7a1, d1it7a3, d1it7b1, d1it7b3
      protein/RNA complex; complexed with gun, mg, zn
  3. Domain(s) for 1it8:
    1. 2162899Domain d1it8a4: 1it8 A:361-505 [83083]
      Other proteins in same PDB: d1it8a1, d1it8a3, d1it8b1, d1it8b3
      protein/RNA complex; complexed with mg, pq0, zn
    2. 2162900Domain d1it8b4: 1it8 B:361-505 [83085]
      Other proteins in same PDB: d1it8a1, d1it8a3, d1it8b1, d1it8b3
      protein/RNA complex; complexed with mg, pq0, zn
  4. Domain(s) for 1j2b:
    1. 2162901Domain d1j2ba3: 1j2b A:361-505 [84012]
      Other proteins in same PDB: d1j2ba1, d1j2ba2, d1j2bb1, d1j2bb2
      protein/RNA complex; complexed with mg, zn
    2. 2162902Domain d1j2bb3: 1j2b B:361-505 [84015]
      Other proteins in same PDB: d1j2ba1, d1j2ba2, d1j2bb1, d1j2bb2
      protein/RNA complex; complexed with mg, zn

More info for Species Pyrococcus horikoshii [TaxId:53953] from d.17.6.1 Archaeosine tRNA-guanine transglycosylase, C2 domain

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from d.17.6.1 Archaeosine tRNA-guanine transglycosylase, C2 domain: