Lineage for Species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089476Superfamily c.1.19: Cobalamin (vitamin B12)-dependent enzymes [51703] (4 families) (S)
  5. 2089477Family c.1.19.1: Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain [51704] (2 protein domains)
    the subunits are clearly related but only one (alpha) is active
    automatically mapped to Pfam PF01642
  6. 2089495Protein Methylmalonyl-CoA mutase beta subunit, domain 1 [88711] (1 species)
    the subunits are clearly related but only one (alpha) is active
  7. 2089496Species Propionibacterium freudenreichii, subsp. shermanii [TaxId:1744] [88712] (8 PDB entries)

PDB entries in Species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]:

  1. Domain(s) for 1e1c:
    1. 2089507Domain d1e1cb1: 1e1c B:20-475 [29637]
      Other proteins in same PDB: d1e1ca1, d1e1ca2, d1e1cb2, d1e1cc1, d1e1cc2, d1e1cd2
      complexed with b12, dca; mutant
    2. 2089508Domain d1e1cd1: 1e1c D:20-475 [29639]
      Other proteins in same PDB: d1e1ca1, d1e1ca2, d1e1cb2, d1e1cc1, d1e1cc2, d1e1cd2
      complexed with b12, dca; mutant
  2. Domain(s) for 1req:
    1. 2089499Domain d1reqb1: 1req B:20-475 [29621]
      Other proteins in same PDB: d1reqa1, d1reqa2, d1reqb2, d1reqc1, d1reqc2, d1reqd2
      complexed with b12, dca, gol
    2. 2089500Domain d1reqd1: 1req D:17-475 [29623]
      Other proteins in same PDB: d1reqa1, d1reqa2, d1reqb2, d1reqc1, d1reqc2, d1reqd2
      complexed with b12, dca, gol
  3. Domain(s) for 2req:
    1. 2089509Domain d2reqb1: 2req B:17-475 [29641]
      Other proteins in same PDB: d2reqa1, d2reqa2, d2reqb2, d2reqc1, d2reqc2, d2reqd2
      complexed with b12, coa
    2. 2089510Domain d2reqd1: 2req D:17-475 [29643]
      Other proteins in same PDB: d2reqa1, d2reqa2, d2reqb2, d2reqc1, d2reqc2, d2reqd2
      complexed with b12, coa
  4. Domain(s) for 3req:
  5. Domain(s) for 4req:
    1. 2089503Domain d4reqb1: 4req B:20-475 [29629]
      Other proteins in same PDB: d4reqa1, d4reqa2, d4reqb2, d4reqc1, d4reqc2, d4reqd2
      complexed with 5ad, b12, gol, mca, sca
    2. 2089504Domain d4reqd1: 4req D:20-475 [29631]
      Other proteins in same PDB: d4reqa1, d4reqa2, d4reqb2, d4reqc1, d4reqc2, d4reqd2
      complexed with 5ad, b12, gol, mca, sca
  6. Domain(s) for 5req:
    1. 2089505Domain d5reqb1: 5req B:20-475 [29633]
      Other proteins in same PDB: d5reqa1, d5reqa2, d5reqb2, d5reqc1, d5reqc2, d5reqd2
      complexed with b12, gol, mcd, scd; mutant
    2. 2089506Domain d5reqd1: 5req D:20-475 [29635]
      Other proteins in same PDB: d5reqa1, d5reqa2, d5reqb2, d5reqc1, d5reqc2, d5reqd2
      complexed with b12, gol, mcd, scd; mutant
  7. Domain(s) for 6req:
    1. 2089501Domain d6reqb1: 6req B:20-475 [29625]
      Other proteins in same PDB: d6reqa1, d6reqa2, d6reqb2, d6reqc1, d6reqc2, d6reqd2
      complexed with 3cp, b12, gol
    2. 2089502Domain d6reqd1: 6req D:20-475 [29627]
      Other proteins in same PDB: d6reqa1, d6reqa2, d6reqb2, d6reqc1, d6reqc2, d6reqd2
      complexed with 3cp, b12, gol
  8. Domain(s) for 7req:
    1. 2089497Domain d7reqb1: 7req B:16-475 [29617]
      Other proteins in same PDB: d7reqa1, d7reqa2, d7reqb2, d7reqc1, d7reqc2, d7reqd2
      complexed with 2cp, b12, gol
    2. 2089498Domain d7reqd1: 7req D:16-475 [29619]
      Other proteins in same PDB: d7reqa1, d7reqa2, d7reqb2, d7reqc1, d7reqc2, d7reqd2
      complexed with 2cp, b12, gol

More info for Species Propionibacterium freudenreichii, subsp. shermanii [TaxId:1744] from c.1.19.1 Methylmalonyl-CoA mutase beta subunit, domain 1

Timeline for Species Propionibacterium freudenreichii, subsp. shermanii [TaxId:1744] from c.1.19.1 Methylmalonyl-CoA mutase beta subunit, domain 1: