Lineage for Protein: Pseudouridine synthase II TruB, C-terminal domain

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 813146Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 813147Superfamily b.122.1: PUA domain-like [88697] (13 families) (S)
  5. 813148Family b.122.1.1: PUA domain [88698] (6 proteins)
    RNA-binding domain
  6. 813171Protein Pseudouridine synthase II TruB, C-terminal domain [88699] (5 species)

Species:

  1. 813172Archaeon Methanococcus jannaschii [TaxId:2190] [141698] (1 PDB entry)
    Uniprot Q57612 247-331
  2. 813174Archaeon Pyrococcus furiosus [TaxId:2261] [141699] (3 PDB entries)
    Uniprot Q7LWY0 250-333
    1. Domains for 2ey4:
      1. 813175Domain d2ey4a1: 2ey4 A:253-336 [132578]
        Other proteins in same PDB: d2ey4a2, d2ey4b2, d2ey4c1, d2ey4d1, d2ey4e1, d2ey4f1
        complexed with zn
      2. 813176Domain d2ey4b1: 2ey4 B:253-336 [132580]
        Other proteins in same PDB: d2ey4a2, d2ey4b2, d2ey4c1, d2ey4d1, d2ey4e1, d2ey4f1
        automatically matched to 2EY4 A:253-336
        complexed with zn
    2. Domain for 2hvy:
    3. Domain for 2rfk:
  3. 813179Escherichia coli [TaxId:562] [88700] (3 PDB entries)
    1. Domain for 1k8w:
    2. Domain for 1r3f:
    3. Domain for 1zl3:
  4. 813183Mycobacterium tuberculosis [TaxId:1773] [102024] (1 PDB entry)
  5. 813186Thermotoga maritima [TaxId:2336] [102023] (4 PDB entries)
    1. Domain for 1r3e:
    2. Domains for 1ze1:
      1. 813189Domain d1ze1a1: 1ze1 A:229-308 [124962]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automatically matched to d1r3ea1
        complexed with mg
      2. 813190Domain d1ze1b1: 1ze1 B:229-308 [124964]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automatically matched to d1r3ea1
        complexed with mg
      3. 813191Domain d1ze1c1: 1ze1 C:229-308 [124966]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automatically matched to d1r3ea1
        complexed with mg
      4. 813192Domain d1ze1d1: 1ze1 D:229-308 [124968]
        Other proteins in same PDB: d1ze1a2, d1ze1b2, d1ze1c2, d1ze1d2
        automatically matched to d1r3ea1
        complexed with mg
    3. Domains for 1ze2:
      1. 813193Domain d1ze2a1: 1ze2 A:229-308 [124970]
        Other proteins in same PDB: d1ze2a2, d1ze2b2
        automatically matched to d1r3ea1
        complexed with fhu
      2. 813194Domain d1ze2b1: 1ze2 B:229-308 [124972]
        Other proteins in same PDB: d1ze2a2, d1ze2b2
        automatically matched to d1r3ea1
        complexed with fhu
    4. Domain for 2ab4:

More info for Protein Pseudouridine synthase II TruB, C-terminal domain from b.122.1.1: PUA domain

Timeline for Protein Pseudouridine synthase II TruB, C-terminal domain from b.122.1.1: PUA domain: