Lineage for Superfamily b.122.1: PUA domain-like

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1335534Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 1335535Superfamily b.122.1: PUA domain-like [88697] (14 families) (S)

Families:

  1. 1335536b.122.1.1: PUA domain [88698] (6 proteins)
    RNA-binding domain
  2. 1335586b.122.1.2: YggJ N-terminal domain-like [89451] (3 proteins)
  3. 1335605b.122.1.3: ATP sulfurylase N-terminal domain [63801] (1 protein)
    contains extra structures; some similarity to the PK beta-barrel domain
    automatically mapped to Pfam PF14306
  4. 1335641b.122.1.4: Hypothetical protein EF3133 [110339] (1 protein)
    Pfam PF06171; DUF984
  5. 1335646b.122.1.5: Hypothetical protein TTHA0113 [117348] (2 proteins)
    Pfam PF04266; DUF437
  6. 1335653b.122.1.6: ProFAR isomerase associated domain [117351] (3 proteins)
    Pfam PF07060; DUF1530
  7. 1335666b.122.1.7: yqfB-like [117356] (1 protein)
    Pfam PF06164; DUF978
  8. 1335670b.122.1.8: Atu2648/PH1033-like [141703] (7 proteins)
    Pfam PF01878; DUF55
  9. 1335697b.122.1.9: Hypothetical RNA methyltransferase domain (HRMD) [141716] (3 proteins)
    N-terminal part of Pfam PF03602, structurally similar to PUA domain family
  10. 1335718b.122.1.10: LON domain-like [141723] (3 proteins)
    Pfam PF02190
  11. 1335735b.122.1.11: PrgU-like [159365] (2 proteins)
    Pfam PF09627
  12. 1335742b.122.1.12: SRA domain-like [159368] (2 proteins)
    Pfam PF02182; recognizes the modified cytosine base (m5C) by flipping it out of DNA
  13. 1335773b.122.1.13: YtmB-like [159372] (1 protein)
    PfamB PB020780
    automatically mapped to Pfam PF10763
  14. 1335784b.122.1.0: automated matches [191599] (1 protein)
    not a true family

More info for Superfamily b.122.1: PUA domain-like

Timeline for Superfamily b.122.1: PUA domain-like: