Lineage for Protein: C-terminal domain of RNA polymerase II subunit RBP7 (RpoE)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2049950Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2051128Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 2051511Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (31 protein domains)
    barrel, closed; n=5, S=8
  6. 2051532Protein C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) [88670] (3 species)

Species:

  1. 2051533Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [117195] (6 PDB entries)
    Uniprot P34087
    1. Domains for 1y14:
      1. 2051534Domain d1y14b1: 1y14 B:81-171 [116323]
        Other proteins in same PDB: d1y14a_, d1y14b2, d1y14c_, d1y14d2
      2. 2051535Domain d1y14d1: 1y14 D:81-171 [116326]
        Other proteins in same PDB: d1y14a_, d1y14b2, d1y14c_, d1y14d2
    2. Domain for 2b8k:
    3. Domain for 2ja5:
    4. Domain for 2ja6:
    5. Domains for 2ja7:
      1. 2051537Domain d2ja7g1: 2ja7 G:81-171 [138198]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
        automatically matched to d1y14b1
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
      2. 2051538Domain d2ja7s1: 2ja7 S:81-171 [138214]
        Other proteins in same PDB: d2ja7a1, d2ja7b1, d2ja7c1, d2ja7c2, d2ja7d1, d2ja7e1, d2ja7e2, d2ja7f1, d2ja7g2, d2ja7h1, d2ja7i1, d2ja7i2, d2ja7j1, d2ja7k1, d2ja7l1, d2ja7m1, d2ja7n1, d2ja7o1, d2ja7o2, d2ja7p1, d2ja7q1, d2ja7q2, d2ja7r1, d2ja7s2, d2ja7t1, d2ja7u1, d2ja7u2, d2ja7v1, d2ja7w1, d2ja7x1
        automatically matched to d1y14b1
        protein/DNA complex; protein/RNA complex; complexed with mg, zn
    6. Domain for 2ja8:
  2. 2051542Human (Homo sapiens) [TaxId:9606] [141309] (1 PDB entry)
    Uniprot P62487 78-171
  3. 2051547Methanococcus jannaschii [TaxId:2190] [88671] (1 PDB entry)

More info for Protein C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) from b.40.4.5: Cold shock DNA-binding domain-like

Timeline for Protein C-terminal domain of RNA polymerase II subunit RBP7 (RpoE) from b.40.4.5: Cold shock DNA-binding domain-like: