Lineage for Family a.4.13.2: Sigma4 domain

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2304501Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2308190Superfamily a.4.13: Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (4 families) (S)
  5. 2308224Family a.4.13.2: Sigma4 domain [88665] (5 protein domains)

Protein Domains:

  1. 2308225Sigma factor sigma-28 (FliA) [101057] (1 species)
  2. 2308232Sigma70 (SigA, RpoD) [88666] (4 species)
    Pfam PF03979
    1. 2308233Species Escherichia coli [TaxId:562] [116816] (3 PDB entries)
      Uniprot P00579 546-613
    2. 2308238Species Thermotoga maritima [TaxId:2336] [116817] (2 PDB entries)
      Uniprot P77994 313-399
    3. 2308241Species Thermus aquaticus [TaxId:271] [88669] (3 PDB entries)
    4. 2308246Species Thermus thermophilus [TaxId:274] [88667] (10 PDB entries)
      Uniprot Q9WX78
  3. 2308266SigmaE factor (RpoE) [88993] (1 species)
  4. 2308272SigmaF [74769] (1 species)
  5. 2308275automated matches [193280] (1 species)
    not a true protein

More info for Family a.4.13.2: Sigma4 domain

Timeline for Family a.4.13.2: Sigma4 domain: