Lineage for Protein: Sobemovirus coat protein

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2076096Family b.121.4.7: Tombusviridae-like VP [88643] (5 protein domains)
  6. 2076107Protein Sobemovirus coat protein [88644] (4 species)

Species:

  1. 2076108Cocksfoot mottle virus [TaxId:40979] [82010] (1 PDB entry)
  2. 2076112RYMV (Rice yellow mottle virus) [TaxId:31744] [49626] (1 PDB entry)
  3. 2076116SBMV (Southern bean mosaic virus), cow pea strain [TaxId:12139] [49632] (1 PDB entry)
  4. 2076120SMV (Sesbania mosaic virus) [TaxId:12558] [49624] (5 PDB entries)
    Uniprot Q9EB06
    1. Domains for 1smv:
      1. 2076121Domain d1smva_: 1smv A: [23288]
        complexed with ca
      2. 2076122Domain d1smvb_: 1smv B: [23289]
        complexed with ca
      3. 2076123Domain d1smvc_: 1smv C: [23290]
        complexed with ca
    2. Domain for 1vak:
    3. Domain for 1vb2:
    4. Domain for 1vb4:
    5. Domains for 2vq0:
      1. 2076124Domain d2vq0a1: 2vq0 A:73-268 [153422]
        automatically matched to d1vaka_
        complexed with ca; mutant
      2. 2076125Domain d2vq0b1: 2vq0 B:73-268 [153423]
        automatically matched to d1vaka_
        complexed with ca; mutant
      3. 2076126Domain d2vq0c1: 2vq0 C:73-268 [153424]
        automatically matched to d1vaka_
        complexed with ca; mutant

More info for Protein Sobemovirus coat protein from b.121.4.7: Tombusviridae-like VP

Timeline for Protein Sobemovirus coat protein from b.121.4.7: Tombusviridae-like VP: