SCOPe 2.04: Protein: Tymovirus coat protein

Lineage for Protein: Tymovirus coat protein

Root: SCOPe 2.04
Class b: All beta proteins [48724] (176 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)
Family b.121.4.6: Tymoviridae-like VP [88641] (2 proteins)
automatically mapped to Pfam PF00983
Protein Tymovirus coat protein [88642] (3 species)

Species:

DYMV (Desmodium yellow mottle tymovirus) [TaxId:70821] [49644] (1 PDB entry)
- Domains for 1ddl:
  1. Domain d1ddla_: 1ddl A: [23317]
    protein/RNA complex
  2. Domain d1ddlb_: 1ddl B: [23318]
    protein/RNA complex
  3. Domain d1ddlc_: 1ddl C: [23319]
    protein/RNA complex
PHMV (Physalis mottle virus) [TaxId:72539] [49642] (2 PDB entries)
1. Domains for 1e57:
  1. Domain d1e57a_: 1e57 A: [59259]
  2. Domain d1e57b_: 1e57 B: [59260]
  3. Domain d1e57c_: 1e57 C: [59261]
2. Domains for 1qjz:
  1. Domain d1qjza_: 1qjz A: [23314]
  2. Domain d1qjzb_: 1qjz B: [23315]
  3. Domain d1qjzc_: 1qjz C: [23316]
TYMV (Turnip yellow mosaic virus) [TaxId:12154] [49640] (2 PDB entries)
Uniprot P03608
1. Domains for 1auy:
  1. Domain d1auya_: 1auy A: [23311]
  2. Domain d1auyb_: 1auy B: [23312]
  3. Domain d1auyc_: 1auy C: [23313]
2. Domains for 1w39:
  1. Domain d1w39a_: 1w39 A: [109146]
  2. Domain d1w39b_: 1w39 B: [109147]
  3. Domain d1w39c_: 1w39 C: [109148]

More info for Protein Tymovirus coat protein from b.121.4.6: Tymoviridae-like VP

Timeline for Protein Tymovirus coat protein from b.121.4.6: Tymoviridae-like VP:

Protein Tymovirus coat protein from b.121.4.6: Tymoviridae-like VP first appeared in SCOP 1.65
Protein Tymovirus coat protein from b.121.4.6: Tymoviridae-like VP appears in SCOPe 2.03
Protein Tymovirus coat protein from b.121.4.6: Tymoviridae-like VP appears in SCOPe 2.05
Protein Tymovirus coat protein from b.121.4.6: Tymoviridae-like VP appears in the current release, SCOPe 2.08