SCOPe 2.08: Family b.121.4.6: Tymoviridae-like VP

Lineage for Family b.121.4.6: Tymoviridae-like VP

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.6: Tymoviridae-like VP [88641] (2 proteins)
   automatically mapped to Pfam PF00983

Proteins:

1. Tymovirus coat protein [88642] (3 species)

   1. Species DYMV (Desmodium yellow mottle tymovirus) [TaxId:70821] [49644] (1 PDB entry)

   2. Species PHMV (Physalis mottle virus) [TaxId:72539] [49642] (2 PDB entries)

   3. Species TYMV (Turnip yellow mosaic virus) [TaxId:12154] [49640] (2 PDB entries)
      Uniprot P03608

2. automated matches [190649] (1 species)
   not a true protein

   • Species Turnip yellow mosaic virus [TaxId:12155] [187728] (2 PDB entries)

More info for Family b.121.4.6: Tymoviridae-like VP

Timeline for Family b.121.4.6: Tymoviridae-like VP:

• Family b.121.4.6: Tymoviridae-like VP first appeared in SCOP 1.65
  
• Family b.121.4.6: Tymoviridae-like VP appears in SCOPe 2.07