SCOPe 2.06: Protein: Cucumovirus coat protein

Lineage for Protein: Cucumovirus coat protein

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)
Family b.121.4.5: Bromoviridae-like VP [88639] (2 proteins)
Protein Cucumovirus coat protein [88640] (4 species)

Species:

BMV (Brome mosaic virus) [TaxId:12302] [74886] (2 PDB entries)
1. Domains for 1js9:
  1. Domain d1js9a_: 1js9 A: [71840]
    complexed with edo, mg
  2. Domain d1js9b_: 1js9 B: [71841]
    complexed with edo, mg
  3. Domain d1js9c_: 1js9 C: [71842]
    complexed with edo, mg
2. Domains for 1yc6:
  1. Domain d1yc61_: 1yc6 1: [122911]
  2. Domain d1yc62_: 1yc6 2: [122912]
  3. Domain d1yc63_: 1yc6 3: [122913]
  4. Domain d1yc64_: 1yc6 4: [122914]
  5. Domain d1yc6a_: 1yc6 A: [122915]
  6. Domain d1yc6b_: 1yc6 B: [122916]
  7. Domain d1yc6c_: 1yc6 C: [122917]
  8. Domain d1yc6d_: 1yc6 D: [122918]
  9. Domain d1yc6e_: 1yc6 E: [122919]
  10. Domain d1yc6f_: 1yc6 F: [122920]
  11. Domain d1yc6g_: 1yc6 G: [122921]
  12. Domain d1yc6h_: 1yc6 H: [122922]
  13. Domain d1yc6i_: 1yc6 I: [122923]
  14. Domain d1yc6j_: 1yc6 J: [122924]
  15. Domain d1yc6k_: 1yc6 K: [122925]
  16. Domain d1yc6l_: 1yc6 L: [122926]
  17. Domain d1yc6m_: 1yc6 M: [122927]
  18. Domain d1yc6n_: 1yc6 N: [122928]
  19. Domain d1yc6o_: 1yc6 O: [122929]
  20. Domain d1yc6p_: 1yc6 P: [122930]
  21. Domain d1yc6q_: 1yc6 Q: [122931]
  22. Domain d1yc6r_: 1yc6 R: [122932]
  23. Domain d1yc6s_: 1yc6 S: [122933]
  24. Domain d1yc6t_: 1yc6 T: [122934]
  25. Domain d1yc6u_: 1yc6 U: [122935]
  26. Domain d1yc6v_: 1yc6 V: [122936]
  27. Domain d1yc6w_: 1yc6 W: [122937]
  28. Domain d1yc6x_: 1yc6 X: [122938]
  29. Domain d1yc6y_: 1yc6 Y: [122939]
  30. Domain d1yc6z_: 1yc6 Z: [122940]
CMV (Cucumber mosaic virus), strain fny [TaxId:12305] [49646] (1 PDB entry)
- Domains for 1f15:
  1. Domain d1f15a_: 1f15 A: [23320]
  2. Domain d1f15b_: 1f15 B: [23321]
  3. Domain d1f15c_: 1f15 C: [23322]
Cowpea chlorotic mottle virus [TaxId:12303] [49636] (1 PDB entry)
- Domains for 1cwp:
  1. Domain d1cwpa_: 1cwp A: [23305]
    protein/RNA complex
  2. Domain d1cwpb_: 1cwp B: [23306]
    protein/RNA complex
  3. Domain d1cwpc_: 1cwp C: [23307]
    protein/RNA complex
TAV (Tomato aspermy virus) [TaxId:12315] [82012] (1 PDB entry)
- Domains for 1laj:
  1. Domain d1laja_: 1laj A: [77865]
    protein/RNA complex; complexed with mg, po4
  2. Domain d1lajb_: 1laj B: [77866]
    protein/RNA complex; complexed with mg, po4
  3. Domain d1lajc_: 1laj C: [77867]
    protein/RNA complex; complexed with mg, po4

More info for Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP

Timeline for Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP:

Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP first appeared in SCOP 1.65
Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP appears in SCOPe 2.05
Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP appears in SCOPe 2.07
Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP appears in the current release, SCOPe 2.08