Lineage for Protein: Cucumovirus coat protein

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. Family b.121.4.5: Bromoviridae-like VP [88639] (2 proteins)
  6. Protein Cucumovirus coat protein [88640] (4 species)

Species:

  1. BMV (Brome mosaic virus) [TaxId:12302] [74886] (3 PDB entries)
    1. Domains for 1js9:
      1. Domain d1js9a_: 1js9 A: [71840]
        complexed with mg, p6g
      2. Domain d1js9b_: 1js9 B: [71841]
        complexed with mg, p6g
      3. Domain d1js9c_: 1js9 C: [71842]
        complexed with mg, p6g
    2. Domains for 1yc6:
      1. Domain d1yc61_: 1yc6 1: [122911]
      2. Domain d1yc62_: 1yc6 2: [122912]
      3. Domain d1yc63_: 1yc6 3: [122913]
      4. Domain d1yc64_: 1yc6 4: [122914]
      5. Domain d1yc6a_: 1yc6 A: [122915]
      6. Domain d1yc6b_: 1yc6 B: [122916]
      7. Domain d1yc6c_: 1yc6 C: [122917]
      8. Domain d1yc6d_: 1yc6 D: [122918]
      9. Domain d1yc6e_: 1yc6 E: [122919]
      10. Domain d1yc6f_: 1yc6 F: [122920]
      11. Domain d1yc6g_: 1yc6 G: [122921]
      12. Domain d1yc6h_: 1yc6 H: [122922]
      13. Domain d1yc6i_: 1yc6 I: [122923]
      14. Domain d1yc6j_: 1yc6 J: [122924]
      15. Domain d1yc6k_: 1yc6 K: [122925]
      16. Domain d1yc6l_: 1yc6 L: [122926]
      17. Domain d1yc6m_: 1yc6 M: [122927]
      18. Domain d1yc6n_: 1yc6 N: [122928]
      19. Domain d1yc6o_: 1yc6 O: [122929]
      20. Domain d1yc6p_: 1yc6 P: [122930]
      21. Domain d1yc6q_: 1yc6 Q: [122931]
      22. Domain d1yc6r_: 1yc6 R: [122932]
      23. Domain d1yc6s_: 1yc6 S: [122933]
      24. Domain d1yc6t_: 1yc6 T: [122934]
      25. Domain d1yc6u_: 1yc6 U: [122935]
      26. Domain d1yc6v_: 1yc6 V: [122936]
      27. Domain d1yc6w_: 1yc6 W: [122937]
      28. Domain d1yc6x_: 1yc6 X: [122938]
      29. Domain d1yc6y_: 1yc6 Y: [122939]
      30. Domain d1yc6z_: 1yc6 Z: [122940]
    3. Domains for 6voc:
      1. Domain d6vocb_: 6voc B: [385950]
        automated match to d1js9c_
      2. Domain d6vocc_: 6voc C: [385884]
        automated match to d1js9c_
  2. CMV (Cucumber mosaic virus), strain fny [TaxId:12305] [49646] (1 PDB entry)
  3. Cowpea chlorotic mottle virus [TaxId:12303] [49636] (1 PDB entry)
  4. TAV (Tomato aspermy virus) [TaxId:12315] [82012] (1 PDB entry)

More info for Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP

Timeline for Protein Cucumovirus coat protein from b.121.4.5: Bromoviridae-like VP: