SCOPe 2.08: Family b.121.4.3: Caliciviridae-like VP

Lineage for Family b.121.4.3: Caliciviridae-like VP

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.3: Caliciviridae-like VP [88637] (2 proteins)

Proteins:

1. Calicivirus capsid protein [63691] (1 species)
   includes the P (protruding) domain of complex beta-structure containing a beta-barrel similar to the second domain of EF-TU

   • Species Norwalk virus [TaxId:11983] [63692] (1 PDB entry)

2. automated matches [371188] (1 species)
   not a true protein

   • Species Norwalk virus (strain gi/human/united states/norwalk/1968) [TaxId:524364] [371189] (1 PDB entry)

More info for Family b.121.4.3: Caliciviridae-like VP

Timeline for Family b.121.4.3: Caliciviridae-like VP:

• Family b.121.4.3: Caliciviridae-like VP first appeared in SCOP 1.65
  
• Family b.121.4.3: Caliciviridae-like VP appears in SCOPe 2.07