Lineage for Family b.121.4.2: Comoviridae-like VP

  1. Root: SCOP 1.69
  2. 450777Class b: All beta proteins [48724] (144 folds)
  3. 472284Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 472367Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (8 families) (S)
  5. 472642Family b.121.4.2: Comoviridae-like VP [88636] (2 proteins)
    duplication: mature coat protein consists of three similar domains that can be in a single chain or in two separate chains

Proteins:

  1. 472643Comovirus coat proteins (VP37 and VP23) [49627] (2 species)
    chain 1 is one-domain VP23; chain 2 is two-domain VP37
    1. 472644Species BPMV (Bean pod mottle virus) [TaxId:12260] [49628] (3 PDB entries)
    2. 472654Species CPMV (Cowpea mosaic virus) [TaxId:12264] [89227] (1 PDB entry)
  2. 472658Nepovirus capsid protein [49629] (1 species)
    duplication: cnosists of three very similar domains

More info for Family b.121.4.2: Comoviridae-like VP

Timeline for Family b.121.4.2: Comoviridae-like VP: