Lineage for Family b.121.4.2: Comoviridae-like VP

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075967Family b.121.4.2: Comoviridae-like VP [88636] (3 protein domains)
    duplication: mature coat protein consists of three similar domains that can be in a single chain or in two separate chains

Protein Domains:

  1. 2075968Comovirus coat proteins (VP37 and VP23) [49627] (2 species)
    chain 1 is one-domain VP23; chain 2 is two-domain VP37
    1. 2075969Species BPMV (Bean pod mottle virus) [TaxId:12260] [49628] (3 PDB entries)
    2. 2075979Species CPMV (Cowpea mosaic virus) [TaxId:12264] [89227] (2 PDB entries)
  2. 2075986Nepovirus capsid protein [49629] (1 species)
    duplication: cnosists of three very similar domains
  3. 2075991automated matches [310893] (1 species)
    not a true protein

More info for Family b.121.4.2: Comoviridae-like VP

Timeline for Family b.121.4.2: Comoviridae-like VP: